Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1548 82.4 5e-11 >seq1548 Length=38083 Score = 82.4 bits (90), Expect = 5e-11 Identities = 183/272 (67%), Gaps = 2/272 (1%) Strand=Plus/Minus Query 97003 AGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTC-TGTGAGAGCATCAATGTGATT 97061 |||||||| || || | ||||| || ||| || | ||| || | || | |||||| Sbjct 4752 AGTGTTGGAAACGGGCGTGGAGTGCGTTCAAGTTGTGCCTGT-AGCGGTTCCAAGTGATT 4694 Query 97062 CACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGAC 97121 || || || || |||||||| | |||| ||| || || || | |||||| || Sbjct 4693 CATGTAGATATGGGCATCTCCGATCACATGAACAAACTCGCCGGGTTGGAGATCAGTCAC 4634 Query 97122 ATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCC 97181 || || ||||| || || || | ||||||||||| || || || || || || || Sbjct 4633 GTGTGCAATCATTTTTGTCAAAAGCGCGTAGCTAGCAATATTGAATGGAACGCCCAGACC 4574 Query 97182 CATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 |||||||| |||| || || | || || || | | |||| || ||||| || Sbjct 4573 AATATCAGCGGATCGCTGGTACATTTGGCATGATAATTCCCCATTTGCAACGTAAAATTG 4514 Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTT 97273 | || | ||||||||| || || ||||||| Sbjct 4513 GCACATGAGATGACAGGGAGGTAATGCCATTT 4482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346736947154810