Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq546 93.3 6e-14 >seq546 Length=49788 Score = 93.3 bits (102), Expect = 6e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 || || || || || |||||||| || || ||||| | ||| |||| | || ||| Sbjct 29524 ACTAAGTGCAACGTTGATTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCCGTCTTCT 29465 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | |||||||||||| || |||| | ||||||||| ||||||||||||||||| ||||| Sbjct 29464 AGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTG 29406 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | ||| | || || || || || || |||||||| || || ||||| | Sbjct 29772 TTCCACCACGAAGACGTAGCACTAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCG 29713 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||| | | || |||| |||||||||||| || |||| | ||||||||| |||| Sbjct 29712 CAAGAGTACGTCCGTCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAG 29653 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||||||||| || || || Sbjct 29652 GAATTCCTTCCTTGTCCTG 29634 Score = 89.7 bits (98), Expect = 8e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | ||| | || ||||| || || || |||||||| || || ||||| | Sbjct 30000 TTCCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCG 29941 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 ||| |||| | || |||| |||||| || || || |||| | ||||||||| |||| Sbjct 29940 CAAGCGTTCGTCCGTCTTCTAGTTGTTTACCGGCGAAGATCAGACGTTGCTGATCAGGAG 29881 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||||||||| || || || Sbjct 29880 GAATTCCTTCCTTGTCCTG 29862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743422929007360