Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq6453 205 9e-48 >seq6453 Length=80198 Score = 205 bits (226), Expect = 9e-48 Identities = 566/858 (66%), Gaps = 30/858 (3%) Strand=Plus/Minus Query 15949 ATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCAT 16008 |||||| | ||| | || ||||| || ||||||||||||| | ||||| | ||||| Sbjct 49531 ATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCAT 49472 Query 16009 AAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGC--ATCCCAATTCCAAC-AATAA 16065 | ||||| ||||| ||| | ||| | || | |||| | || || || Sbjct 49471 CCAGTCAAAGGGATTA---GAAGCGTGATATAACTTGCTGACGCCAAGTGCATGTAACAA 49415 Query 16066 TCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTT 16125 || |||||||||||| || || || || ||| ||| | |||||||| |||| | Sbjct 49414 TCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTC 49355 Query 16126 AACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTC---AATGATTAT 16182 || || | || ||| || ||| | || ||| || |||| || || ||||||| Sbjct 49354 GACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGC 49295 Query 16183 ATCTCTTACTACACTATTTAACGGAGGGTTTAATAAGTGTTTAAA---CATTATACAAGC 16239 || | || | || ||| | || || |||| | ||| | ||| || Sbjct 49294 ATG----AATAGAGCCTTCT--GGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGC 49241 Query 16240 AAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGG 16299 ||| |||||||| | |||||| || | ||| || | ||| |||||||| ||| || || Sbjct 49240 AAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGG 49181 Query 16300 CATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACC 16359 ||| | ||||||||| || | ||||||||||| | ||||| || || || || || || Sbjct 49180 CATCAATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCC 49121 Query 16360 TTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc-- 16417 ||| || || ||||| || |||| || || | ||| || ||||| ||| Sbjct 49120 TTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCAT----ACTTTGGATCGC 49065 Query 16418 --cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAA 16475 ||||| ||||| | |||||| | |||| || || | || || || | Sbjct 49064 ACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCATA 49005 Query 16476 ATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTT 16535 ||||| | |||||| | |||| || || ||||| || | ||| ||||| || Sbjct 49004 GTAAATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTT 48945 Query 16536 CTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTT 16595 | || || ||||| || ||||| || || || ||||||||||||| |||||| | |||| Sbjct 48944 CCGAGTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGATTT 48885 Query 16596 GTACTTCAGAG-TAAAACCTTTCT-GCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653 | || ||| | | ||| || | || | ||||| ||||| || ||||| || ||||| Sbjct 48884 GAACCTCACTGCTGAAA--TTCATGGCGAGATTTTCATTAACAATCCCATCACTGGCTGC 48827 Query 16654 AAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAGTTTTAACCAGTC 16713 ||| || || | | |||||| ||||| | | | || || || || | || | |||||| Sbjct 48826 AAAGAAGGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATATTAAGCCAGTC 48767 Query 16714 AGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTT 16773 | | || | ||||||| |||||| | |||||||| || | || || || Sbjct 48766 ATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTT 48707 Query 16774 ATACATTTTCCATATGTC 16791 |||||| | ||| || || Sbjct 48706 ATACATGTCCCAAATCTC 48689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462447635673800