Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq151 237 2e-57 seq6453 208 1e-48 >seq151 Length=34927 Score = 237 bits (262), Expect = 2e-57 Identities = 1035/1624 (64%), Gaps = 24/1624 (1%) Strand=Plus/Plus Query 62683 CGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATG 62742 || |||| || |||||||| || | || || || || | || | ||| ||||||| Sbjct 29788 CGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAGCAGCTTTGCTTTCAAATG 29847 Query 62743 GATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTAT 62802 || | | | || | ||||| || || | |||||||| || || || || |||| || Sbjct 29848 GAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGCCGATTCCAATCGGTCGAT 29907 Query 62803 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 62862 ||| || ||| | || ||||| ||||| ||||||||||| | ||| || ||||| | Sbjct 29908 GTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAATAATTGAGATCAATGATTTTGT 29967 Query 62863 TGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCAT 62922 |||||||| | || | ||| | || | | ||| ||| | |||| | | Sbjct 29968 TGAGATTTTTCGTAACGATTTTTGTGATTTCGTATAATTTTGCAAACTGAAATT--CTTT 30025 Query 62923 CTATTACAAACATGTT--CAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGC 62980 || |||| | || || |||||| | || |||| ||| || || || || || || | Sbjct 30026 CTGATACACAAATTTTGACAATGCGATGGAAGCCAAATTGCATACTGCCACTTCTTTGGA 30085 Query 62981 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTG 63040 || | || | || || ||| ||| ||||| || | || ||||| | ||| || Sbjct 30086 GTCTGAGTACTCGATGATTTCACAGCAGAGATTGCTTGATCGAATGGTTCCAAGATTCTG 30145 Query 63041 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 63100 ||||| || ||||| || || || ||||| || | || || || || ||||| Sbjct 30146 CTGATTGGATTTACGATTACAAGCGTCTTTGTAAAGCATATACGGCGTTCCGGTCTCAAT 30205 Query 63101 CTGAGATTCTATAATCGCTTTCCAGACGACT-CGAGCCTTTATTATAGATTTGT---ATC 63156 |||| || | ||| || ||| | | | | | |||| | || | || Sbjct 30206 CTGACTATCCAAAATGGCAAACCACA--ATTGCTGGGCTTTGACAGTCTTTCGGGCAATG 30263 Query 63157 TCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63216 | ||| ||||| ||| || || || ||| |||||| | | | Sbjct 30264 T--TTTGAGACTCGTACTTTTCATATAACGCATCAAATTCGCTTCCCCATGTCTCATAAA 30321 Query 63217 ATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63276 || ||| || | |||||| | || ||| ||| || || | ||| ||||||| Sbjct 30322 GTCGTGGAGCCTCGTTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCA 30381 Query 63277 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTC 63336 |||| ||||| || ||||||||||| ||||| ||||| || || ||| || |||| Sbjct 30382 TAAACAGATCGGGGATCCAAAGAGCATAAAATAAATCTCGTGCTCGATGGAGTTCATTTC 30441 Query 63337 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63396 | |||||| || || || ||| | | ||||| | |||||| || || | || | Sbjct 30442 CATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAA 30501 Query 63397 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63456 | || | | || ||| || || || ||||| | ||||| ||| |||| ||| Sbjct 30502 TTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGA 30561 Query 63457 AAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTC 63516 | || | | |||||||| ||| || || || | ||||| || ||| ||||| | Sbjct 30562 ACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGT 30621 Query 63517 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63576 ||| |||||||| ||| | || || || || ||| || || || | | Sbjct 30622 TGGTGGAGCGAATATTGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACG 30681 Query 63577 CGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAA 63636 | ||| |||| | |||||| || ||||| || || |||||| |||| | ||||| Sbjct 30682 CACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAA 30741 Query 63637 AACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63696 |||| || | |||| | |||| ||||||||||| || | || |||| || |||| Sbjct 30742 AACACGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCG 30801 Query 63697 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 63756 |||| | |||| || | | | ||||| || | | | | || | || | || | Sbjct 30802 TAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGGCATCCAAATTCTCTTTGT 30861 Query 63757 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA-ACAATTTTGTTGTTT 63815 | || || || || || ||||||| ||| || || || | |||| ||| |||| || Sbjct 30862 GTATGCCGACAGCCACTCGCATTATCATATGTTGTGGGCGTTCACACACTTTT-CCATTC 30920 Query 63816 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63875 | ||||| || ||||| |||| ||||||||| |||||||||| ||| ||||||| Sbjct 30921 ACACGCAACAGATACGATTTCTCCAGAGTTTTAAAGCCAAAATAGTCGTAATCAAAGTCT 30980 Query 63876 CGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTA 63935 | || ||||| | |||||||| || || | | |||| || || ||| Sbjct 30981 CTATCACCGATAATGGCGGAATTGAGAGCTTCTTTGTTCTCCATAACAAT-TCGATGCAC 31039 Query 63936 ATACTTG--AAATAATCGGAGAATG---TTTCCCATTTTTAGGATTAACATAGTTGAATA 63990 || ||| | |||| |||| | ||| ||| | ||| | || |||| Sbjct 31040 ATCGTTGGCGATTAAT-GGAGCGGGTACTTTGGTGGTTTCGTGCTTATTTTCGTAAAATA 31098 Query 63991 AATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTA 64050 | | || |||||| || | ||| ||||| | || |||| ||| || || || | Sbjct 31099 A---TTGAATGTTTTCACTGAAGACTTTGTTTGTATTTTTATGTAAATTGGAAATAGCAA 31155 Query 64051 TTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGG 64110 ||| || || | ||| |||| ||||||||||| | || ||||| |||| | Sbjct 31156 TTCGAGCAGCCAATTTGGAGAAATCGGGATGTTGTGTGCTGCAGTAAGCTGCGGTTTCTG 31215 Query 64111 CTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCA 64170 |||||| ||||||||| || || || || ||| | || ||| || ||| Sbjct 31216 CTGCCAATTCGTCCAATTCCGATGTGGTGACGCCCGGATACACGCCAGCAATCACTTTCT 31275 Query 64171 TAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTCTAATAC 64230 || ||||| | ||||| | | || ||||||||| ||||| | |||| | || | Sbjct 31276 GAGATATTTGGACGGGATCAACGTATTCTGTGTTTAAGTTGTAGCAGAGTTTTGTGATTC 31335 Query 64231 GAGACGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGACAAACA 64290 | | |||||||| || || |||| ||| || ||| | ||||| |||||| ||| Sbjct 31336 GCGCAGTGATTTTGTCGAATTTGACGACTTCTTTTCGTCCGTCACGTTTGATGACATACA 31395 Query 64291 TTTT 64294 |||| Sbjct 31396 TTTT 31399 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 62076 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 62135 || || |||||||||||||| || || ||||| ||||| |||| |||||||| Sbjct 29175 GTTCGGAGATAGTACATTCCTGTCTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAA 29234 Query 62136 GTTAGTTTGGAATAAC--TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGA 62193 || ||||| | | || |||| || || || || ||||| | |||||||| ||| | Sbjct 29235 GTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTTAGTGATTGACTCTGACAAA 29292 Query 62194 TGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAG 62253 || | ||||| | || |||||||| | | |||| |||||| |||||||||| | Sbjct 29293 TGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACTG 29352 Query 62254 TTTT 62257 |||| Sbjct 29353 TTTT 29356 >seq6453 Length=80198 Score = 208 bits (230), Expect = 1e-48 Identities = 415/608 (68%), Gaps = 9/608 (1%) Strand=Plus/Minus Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633 |||||| |||||| || || || || || || || || | ||| || | || || |||| Sbjct 49253 ACATCAGACATGCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAA 49194 Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693 | ||||| ||||| | || || || || ||||||||||| || ||||||||||| Sbjct 49193 AGCAAAGTCCAGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGG 49134 Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT 33753 | || ||||||||||| || || |||||||| | | ||| ||| || | ||| | Sbjct 49133 AGAAAAAGATTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACT 49074 Query 33754 CATGTATC-CACT-TTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 33809 || ||| ||| ||| | ||||| | || || || | || || || || ||||| Sbjct 49073 T-TGGATCGCACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCA 49015 Query 33810 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 33869 || || | | || | |||||| | |||||| | || ||||| ||||| | Sbjct 49014 ATCGCGCATAGTAAATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAAC 48955 Query 33870 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 33929 ||||| |||||| || || ||||| || || || || ||||| || || |||| ||| Sbjct 48954 GAATACACTTCCGAGTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCT 48895 Query 33930 TCGGTAATCTGCACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCAT 33987 || | || || || || | | ||| || | || | ||||||||| || || |||| Sbjct 48894 TCCGGGATTTGAACCTCACTGCTGAAATTCATG--GCGAGATTTTCATTAACAATCCCAT 48837 Query 33988 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTT 34047 ||||||||||||| || ||||| || ||||| ||||| | | | || | | || | Sbjct 48836 CACTGGCTGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATAT 48777 Query 34048 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 34107 || ||| ||||| || || | | ||| | |||||| | |||||||| ||||| Sbjct 48776 TAAGCCAGTCATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCT 48717 Query 34108 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTAT 34167 |||| || |||||||| | ||| || ||| | ||| || || || | ||||| | | Sbjct 48716 CTGCTTTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGT 48657 Query 34168 TTGGATTT 34175 | |||||| Sbjct 48656 TCGGATTT 48649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629729953008240