Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq6453 239 4e-58 >seq6453 Length=80198 Score = 239 bits (264), Expect = 4e-58 Identities = 400/572 (70%), Gaps = 15/572 (3%) Strand=Plus/Minus Query 11622 ACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAA 11681 |||| | ||| ||||| |||||||||| ||||| || | ||| || || ||||| |||| Sbjct 49253 ACATCAGACATGCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAA 49194 Query 11682 ATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA-AATGAACCA 11740 | | ||| ||||||||||||||||| || | ||||||||||| |||| ||||| || Sbjct 49193 AGCAAAGTCCAGGCATCAATCCTCGTTTCTTCAGCCAAAATATAG-AGCAGAATGATCCG 49135 Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCA-------TATAC 11793 || || || ||||| || || || ||||| ||||| ||||||||| || |||| Sbjct 49134 GAGAAAAAGATTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATAC 49075 Query 11794 CTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGT 11853 ||| | | | |||||| ||||| | ||||| || | ||||| ||||| Sbjct 49074 TTTG--GATCG--CACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGT 49019 Query 11854 TTCTATAGCGTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAA 11913 ||| || ||| | ||||||| |||||| | |||| | | |||||||| || || Sbjct 49018 TTCAATCGCGCATAGTAAATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAA 48959 Query 11914 TAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCG 11973 ||| ||||| ||| || || |||||||| || || ||||| |||||||| || ||||| Sbjct 48958 TAACGAATACACTTCCGAGTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCG 48899 Query 11974 TGCCTCTGAACACTGTACATC-CACATAAAATCTTTCCGCTAAATTCTCATTTACAATAC 12032 || || | || || || | | |||| | || | ||| ||||| ||||| | Sbjct 48898 AGCTTCCGGGATTTGAACCTCACTGCTGAAAT-TCATGGCGAGATTTTCATTAACAATCC 48840 Query 12033 CATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTA 12092 ||||||| | |||||| || || | | ||||| ||||||| | | || | | | || Sbjct 48839 CATCACTGGCTGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATA 48780 Query 12093 ATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTG 12152 ||| ||| |||| | || | ||||| | |||||| |||||||||| |||| Sbjct 48779 TATTAAGCCAGTCATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTG 48720 Query 12153 CCACTGATTGTTTATACATTTTCCAGATATCA 12184 || ||| || |||||||| | ||| || ||| Sbjct 48719 CCTCTGCTTTCTTATACATGTCCCAAATCTCA 48688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468459598917520