Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq6453 226 4e-54 seq151 219 6e-52 >seq6453 Length=80198 Score = 226 bits (250), Expect = 4e-54 Identities = 422/610 (69%), Gaps = 11/610 (2%) Strand=Plus/Minus Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209 |||||| |||||| || || || ||||| || || || | ||| || | || || |||| Sbjct 49253 ACATCAGACATGCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAA 49194 Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 36268 | ||||| ||||| | || || || || ||||||||||| || ||| |||||||| Sbjct 49193 AGCAAAGTCCAGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCG 49135 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 36328 || || || |||||||| || ||||||||||| | | ||| ||| || | |||| Sbjct 49134 GAGAAAAAGATTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATAC 49075 Query 36329 TCATGTATC-CACT-TTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 36384 | || ||| ||| ||| | ||||| | || || || | || || || ||||| || Sbjct 49074 TT-TGGATCGCACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTC 49016 Query 36385 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 36444 || || | | || | |||||| | |||||| | |||||||||||||| | Sbjct 49015 AATCGCGCATAGTAAATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAA 48956 Query 36445 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 36504 ||||| |||||| || || ||||| || || ||||| ||||| || || |||| ||| Sbjct 48955 CGAATACACTTCCGAGTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGC 48896 Query 36505 CTCGGTAATCTGTACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCG 36562 || | || || || || | | ||| || | || | ||||||||| || || || Sbjct 48895 TTCCGGGATTTGAACCTCACTGCTGAAATTCATG--GCGAGATTTTCATTAACAATCCCA 48838 Query 36563 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT 36622 |||||||||||||| || ||||| || ||||| ||||| | | | || || | || Sbjct 48837 TCACTGGCTGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATA 48778 Query 36623 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 36682 ||| ||| ||||| || || | | ||| | |||||| | |||||||| |||| Sbjct 48777 TTAAGCCAGTCATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCC 48718 Query 36683 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 36742 ||||| || |||||||| | ||| || ||| | ||| || ||||| | ||||| | Sbjct 48717 TCTGCTTTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGG 48658 Query 36743 TTTTGATTTT 36752 || |||||| Sbjct 48657 TTCGGATTTT 48648 >seq151 Length=34927 Score = 219 bits (242), Expect = 6e-52 Identities = 1029/1623 (63%), Gaps = 22/1623 (1%) Strand=Plus/Plus Query 65476 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 65535 || |||| || ||||| || || | || || || || | || | ||| ||||||| Sbjct 29788 CGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAGCAGCTTTGCTTTCAAATG 29847 Query 65536 GATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTAT 65595 || | | | || | ||||| || || | |||||||| || || || || |||| || Sbjct 29848 GAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGCCGATTCCAATCGGTCGAT 29907 Query 65596 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 65655 ||| || ||| | || ||||| ||||| ||||||||||| | ||| || ||||| | Sbjct 29908 GTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAATAATTGAGATCAATGATTTTGT 29967 Query 65656 TGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCAT 65715 |||||||| | || | ||| | || | | ||| ||| | |||| | | Sbjct 29968 TGAGATTTTTCGTAACGATTTTTGTGATTTCGTATAATTTTGCAAACTGAAATTCTT--T 30025 Query 65716 CTATTACAAACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 65773 || |||| | || || |||||| | || |||| ||| || || || || || || | Sbjct 30026 CTGATACACAAATTTTGACAATGCGATGGAAGCCAAATTGCATACTGCCACTTCTTTGGA 30085 Query 65774 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 65833 || | || | || || ||| ||| ||||| || | |||||||| | ||| || Sbjct 30086 GTCTGAGTACTCGATGATTTCACAGCAGAGATTGCTTGATCGAATGGTTCCAAGATTCTG 30145 Query 65834 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 65893 ||||| || ||||| || || || ||||| || | || || || || ||||| Sbjct 30146 CTGATTGGATTTACGATTACAAGCGTCTTTGTAAAGCATATACGGCGTTCCGGTCTCAAT 30205 Query 65894 CTGAGATTCTATAATCGCTTTCCAGACGACT-CGAGCCTTTATTATAGATTT---GTATC 65949 |||| || | ||| || ||| | | | | | |||| | || || | Sbjct 30206 CTGACTATCCAAAATGGCAAACCACA--ATTGCTGGGCTTTG--ACAGTCTTTCGGGCAA 30261 Query 65950 TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 66009 | |||| ||||| | ||| || || || ||| |||||| | | | Sbjct 30262 TGTTTTGAGACTCGTACTTTTCATATAACGCATCAAATTCGCTTCCCCATGTCTCATAAA 30321 Query 66010 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 66069 || ||| || | |||||| | || ||| ||| || || | ||| ||||||| Sbjct 30322 GTCGTGGAGCCTCGTTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCA 30381 Query 66070 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTC 66129 |||| ||||| || ||||||||||| ||||||||||| | || ||| || |||| Sbjct 30382 TAAACAGATCGGGGATCCAAAGAGCATAAAATAAATCTCGTGCTCGATGGAGTTCATTTC 30441 Query 66130 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATA 66189 | |||||| || || || ||| | | ||||| |||||| || || | || | Sbjct 30442 CATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAA 30501 Query 66190 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 66249 | || | | || ||| || || || ||||| | ||||| ||| |||| ||| Sbjct 30502 TTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGA 30561 Query 66250 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTC 66309 | || | | |||||||| ||| ||||| || | ||||| |||||| ||||| || Sbjct 30562 ACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGT 30621 Query 66310 CACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369 | | |||||||| ||| | || || || || ||| || || || | | Sbjct 30622 TGGTGGAGCGAATATTGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACG 30681 Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429 | ||| |||| | ||| || || ||||| || ||| |||||| |||| | ||||| Sbjct 30682 CACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAA 30741 Query 66430 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 66489 |||| || | |||| | ||| ||||||||||| || | || |||| || |||| Sbjct 30742 AACACGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCG 30801 Query 66490 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 66549 |||| | |||| || | | | ||||| || | | | | || | || | || | Sbjct 30802 TAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGGCATCCAAATTCTCTTTGT 30861 Query 66550 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 66609 | || || || || || ||||||| ||| || || || | |||| | || || | Sbjct 30862 GTATGCCGACAGCCACTCGCATTATCATATGTTGTGGGCGTTCACACACTTTTCCATTCA 30921 Query 66610 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 66669 ||||| || ||||| |||| ||||||||| |||||||||| ||| |||||||| Sbjct 30922 CACGCAACAGATACGATTTCTCCAGAGTTTTAAAGCCAAAATAGTCGTAATCAAAGTCTC 30981 Query 66670 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAA 66729 || ||||| | || ||||| || || | | |||| | || ||| | Sbjct 30982 TATCACCGATAATGGCGGAATTGAGAGCTTCTTTGTTCTCCATAAC-AATTCGATGCACA 31040 Query 66730 TACTTG--AAATAATCGGAGAATG---TTTCCCATTTTTAGGATTGACATAGTTGAATAA 66784 | ||| | |||| |||| | ||| ||| | || | || ||||| Sbjct 31041 TCGTTGGCGATTAAT-GGAGCGGGTACTTTGGTGGTTTCGTGCTTATTTTCGTAAAATAA 31099 Query 66785 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTAT 66844 | || |||||| || | ||| ||||| | ||| |||| ||| || | || || Sbjct 31100 ---TTGAATGTTTTCACTGAAGACTTTGTTTGTATTTTTATGTAAATTGGAAATAGCAAT 31156 Query 66845 TCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGC 66904 || ||| || | ||| |||| ||||||||||| | || ||||| |||| || Sbjct 31157 TCGAGCAGCCAATTTGGAGAAATCGGGATGTTGTGTGCTGCAGTAAGCTGCGGTTTCTGC 31216 Query 66905 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||||| ||||||||| || || || || ||| | || || || ||| Sbjct 31217 TGCCAATTCGTCCAATTCCGATGTGGTGACGCCCGGATACACGCCAGCAATCACTTTCTG 31276 Query 66965 AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACG 67024 || ||||| | ||||| | | || ||||||||| || || | |||| | || || Sbjct 31277 AGATATTTGGACGGGATCAACGTATTCTGTGTTTAAGTTGTAGCAGAGTTTTGTGATTCG 31336 Query 67025 AGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGACAAACAT 67084 | |||||||| || || |||| ||| || ||| | ||||| |||||| |||| Sbjct 31337 CGCAGTGATTTTGTCGAATTTGACGACTTCTTTTCGTCCGTCACGTTTGATGACATACAT 31396 Query 67085 TTT 67087 ||| Sbjct 31397 TTT 31399 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 64869 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 64928 || || |||||||||||||| || || ||||| ||||| |||| |||||||| Sbjct 29175 GTTCGGAGATAGTACATTCCTGTCTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAA 29234 Query 64929 GTTAGTTTGGAATAAC--TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGA 64986 || ||||| | | || |||| || || || || ||||| | |||||||| ||| | Sbjct 29235 GTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTTAGTGATTGACTCTGACAAA 29292 Query 64987 TGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAG 65046 || | ||||| | || |||||||| | | |||| |||||| |||||||||| | Sbjct 29293 TGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACTG 29352 Query 65047 TTTT 65050 |||| Sbjct 29353 TTTT 29356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658081207027720