Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq151 306 5e-78 seq6453 237 2e-57 >seq151 Length=34927 Score = 306 bits (338), Expect = 5e-78 Identities = 1432/2248 (64%), Gaps = 52/2248 (2%) Strand=Plus/Plus Query 78748 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTC 78807 || || |||||||||||||| || || ||||| ||||| ||||||||||||| Sbjct 29175 GTTCGGAGATAGTACATTCCTGTCTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAA 29234 Query 78808 GTTAGTTTGGAATAAC--TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGA 78865 || ||||| | | || |||| || || || || ||||| | |||||||| ||| | Sbjct 29235 GTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTTAGTGATTGACTCTGACAAA 29292 Query 78866 TGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAG 78925 || | ||||| | || |||||||| | | |||| |||||| |||||||||| | Sbjct 29293 TGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACTG 29352 Query 78926 TTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCAT 78982 |||| || | || | || |||| | | |||| || | ||| || | || Sbjct 29353 TTTTGTACTTTTCTTTCACATGAGAAGGAATTTCAGCGATATTTTGTACGGAACCGCGAT 29412 Query 78983 CTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTA- 79041 | | || |||| | ||| |||| || || |||| | || |||| Sbjct 29413 CGCGAAGGATTTGATTCCGAACGTCTGATGTCCACAAATTCATCTCAAT--AAGCTCTTC 29470 Query 79042 -AGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 79100 | ||||| || || | | ||||||||||| | || | ||| || | || || Sbjct 29471 CATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGTT 29530 Query 79101 ACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGG 79160 || | || || | || || ||| || | ||||||||| ||||| || ||||| Sbjct 29531 GGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTGG 29590 Query 79161 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATG-ATCTGATTTTATCTTTTAGAG 79219 ||| || || | || ||| |||| | |||| | | || | || ||||| | Sbjct 29591 CATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCT-ACTTGCTCTTTCAACT 29649 Query 79220 ATTCCCAATCCCAAAGATCAGA--CGGGACA-ACATTCCAAAGATCATATTGTAGAATAC 79276 | ||||||||| || | || ||||| || | ||| | |||| |||| | |||| Sbjct 29650 GCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATAC 29709 Query 79277 CGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCC---TTCCTTTTCGGCTAATT 79333 | |||| | |||||| | || | || || ||||| |||| | || |||| Sbjct 29710 CTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGAGTTCCCGT---GCCAATT 29766 Query 79334 CACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 79393 | || || | || || |||| || ||||| ||||| | || ||||| || Sbjct 29767 CCATGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGC 29826 Query 79394 GTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 79453 | || || ||| ||||||||| | | | || | ||||| || || | ||||||| Sbjct 29827 GAGCAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAA 29886 Query 79454 CACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAAT 79513 | || || || || |||| ||||| || ||| | || ||||| ||||| ||||||| Sbjct 29887 CGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAAT 29946 Query 79514 AATTAATATCTATAATTTTATTGAGATT---CCTGACTATTACTTTGACCACATCCTTTA 79570 |||| | ||| || ||||| |||||||| | | || ||| | ||| || | || Sbjct 29947 AATTGAGATCAATGATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATT---TCGTATA 30003 Query 79571 GTTTGAGAAAATCAAATCGTCCATCTATTACAAACATGTT--CAACGCGACAGATGCCAG 79628 ||| ||| | |||| || ||| |||| | || || ||| |||| || |||| Sbjct 30004 ATTTTGCAAACTGAAAT--TCTTTCTGATACACAAATTTTGACAATGCGATGGAAGCCAA 30061 Query 79629 ATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACT 79688 ||| || || || || || || | || | || | || |||||| |||||| || || Sbjct 30062 ATTGCATACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCT 30121 Query 79689 ACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAG 79748 | ||||||||| | ||| || ||||| || ||||| || || || ||||| Sbjct 30122 TGATCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAG 30181 Query 79749 AATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT-CGAG 79807 || |||| || || || ||||||||| || | ||| || ||| | | | | | Sbjct 30182 CATATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA--ATTGCTGG 30239 Query 79808 CCTTTATTATAGACTT---GTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGA 79864 |||| | || ||| | | |||| ||||| | | |||||| || | Sbjct 30240 GCTTTG--ACAGTCTTTCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCAA 30297 Query 79865 ACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACT 79924 | ||| |||||| || | | || ||| |||| ||||| | || ||| | Sbjct 30298 ATTCGCTTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCATT 30357 Query 79925 CTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 79984 || | || | || ||||||||||| ||||| || ||||||||||| ||||| || Sbjct 30358 CTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAAAT 30417 Query 79985 CTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 80044 ||| | || ||| || ||||| |||||| || || || ||| | | |||| Sbjct 30418 CTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATAT 30477 Query 80045 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTC-GTTTGTTTCCTCCCTGA 80103 | | |||||| || || | || || || | || ||| || | || || || ||| Sbjct 30478 CCGCATGCCAGGGCTCTAGATAAATTGCAA-AAGACCCTTTCCGCTTCCCACCACCTTGA 30536 Query 80104 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA 80163 || | ||||| ||| |||| ||| | || | | |||||||| ||| ||||| || | Sbjct 30537 TCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTT 30596 Query 80164 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATT 80223 ||||| |||||| ||||| || ||| |||||||| ||| | || || Sbjct 30597 CCATTCGTCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAATA 30656 Query 80224 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATG 80283 || || ||| || || || | || ||| |||| | ||| || || ||||| || || Sbjct 30657 CCGCCAGCCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATA 30716 Query 80284 CTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 80343 |||||| |||| | ||||||||| || | |||| | ||| ||||||||| Sbjct 30717 GAATCATCTTGCATGGATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCGCA 30776 Query 80344 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCA 80403 || || | || |||| || |||||||| | |||| |||| | | ||||| || Sbjct 30777 TTGAAAAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCC 30836 Query 80404 ATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGA 80463 | | | | || | || | || || || || || || || ||||||| ||| || || Sbjct 30837 AAAACGGCATCCAAATTCTCTTTGTGTATGCCGACAGCCACTCGCATTATCATATGTTGT 30896 Query 80464 GGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAA 80523 || | |||| | || ||| | ||||| || ||||| |||| ||||||||| Sbjct 30897 GGGCGTTCACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAAAG 30956 Query 80524 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA 80583 |||||||||| ||| |||||||| || ||||| | || ||||| || || Sbjct 30957 CCAAAATAGTCGTAATCAAAGTCTCTATCACCGATAATGGCGGAATTGAGAGCTTCTTTG 31016 Query 80584 TATTTGTTAACTACATCCATGGTGATACTTG--AAATAATCGGAGAATG---TTTCCCAT 80638 | | |||| | || ||| || ||| | |||| |||| | ||| Sbjct 31017 TTCTCCATAAC-AATTCGATGCACATCGTTGGCGATTAAT-GGAGCGGGTACTTTGGTGG 31074 Query 80639 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTT 80698 ||| | ||| | || ||||| | || |||||| || | ||| ||||| | Sbjct 31075 TTTCGTGCTTATTTTCGTAAAATAA---TTGAATGTTTTCACTGAAGACTTTGTTTGTAT 31131 Query 80699 CCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTG 80758 || |||| ||| || | || |||| || || || ||| |||| |||||||||| Sbjct 31132 TTTTATGTAAATTGGAAATAGCAATTCGAGCAGCCAATTTGGAGAAATCGGGATGTTGTG 31191 Query 80759 TAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCAT 80818 | | || ||||| |||| ||||||| ||||||||| || || || || Sbjct 31192 TGCTGCAGTAAGCTGCGGTTTCTGCTGCCAATTCGTCCAATTCCGATGTGGTGACGCCCG 31251 Query 80819 TATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTA 80878 ||| | || || || ||| || ||||| | ||||| | | || ||||||| Sbjct 31252 GATACACGCCAGCAATCACTTTCTGAGATATTTGGACGGGATCAACGTATTCTGTGTTTA 31311 Query 80879 AGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGT 80938 || || || | |||| | || || | |||||||| || || |||| ||| || Sbjct 31312 AGTTGTAGCAGAGTTTTGTGATTCGCGCAGTGATTTTGTCGAATTTGACGACTTCTTTTC 31371 Query 80939 ATCCATTTCGTTTAATGACAAACATTTT 80966 ||| | ||||| |||||| ||||||| Sbjct 31372 GTCCGTCACGTTTGATGACATACATTTT 31399 >seq6453 Length=80198 Score = 237 bits (262), Expect = 2e-57 Identities = 594/892 (67%), Gaps = 23/892 (3%) Strand=Plus/Minus Query 49675 TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATG 49734 ||||| || || ||||| || ||||| || |||||||||| || || || | ||||| Sbjct 49530 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCATC 49471 Query 49735 AAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 49794 | ||||| ||||| | | | | ||| | || | | || | | || | ||||| | Sbjct 49470 CAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGCCAAGTGCATGTAACAATCGA 49411 Query 49795 TCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 49854 ||||| ||||| || || ||| ||||| |||||||||| || || | ||| Sbjct 49410 TCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGACT 49351 Query 49855 GGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA 49914 ||||| | | | |||||||||||| ||| || || || | || || | | Sbjct 49350 GGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCATGA 49291 Query 49915 ACGGTTTCTTCACTCGGTGGATGCAA---TAAATGTTTAAA---CATCAAACATGCGAAA 49968 | | |||| |||| || || |||| | ||||| |||||| || Sbjct 49290 ATAGAGCCTTC------TGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAAG 49237 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 || || || || || || || | ||| || || || || ||||| ||||| ||||| Sbjct 49236 TCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATC 49177 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCAGAAAAGAAGATTCCTTC 50087 | || || || || ||||||||||| || ||| ||||| || || || ||||||||||| Sbjct 49176 AATCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGATTCCTTC 49118 Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATC-CACT-TT 50145 || || |||||||| || | ||| ||| || | ||| | || ||| ||| || Sbjct 49117 GACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTT-TGGATCGCACCATT 49059 Query 50146 TGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 | | ||||| | || || || | || || || || ||||| || || | | || Sbjct 49058 TCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCATAGTAAAT 48999 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | |||||| | |||||| | || ||||| ||||| | ||||| |||||| | Sbjct 48998 GCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGT 48939 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | || ||||| || || || || ||||| || || |||| ||| || | || || || | Sbjct 48938 GTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGATTTGAACCT 48879 Query 50324 CTGTACAAAATCGTTCA--GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381 | | | || |||| || | ||||||||| || || || |||||||||||||| || Sbjct 48878 CACTGCTGAAA--TTCATGGCGAGATTTTCATTAACAATCCCATCACTGGCTGCAAAGAA 48821 Query 50382 CGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGAT 50441 ||||| || ||||| ||||| ||| | || ||| | || ||| ||| ||||| || Sbjct 48820 GGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATATTAAGCCAGTCATTCAT 48761 Query 50442 ATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 50501 || | | ||| | |||||| | |||||||| ||||||||| || |||||||| Sbjct 48760 GTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACAT 48701 Query 50502 ATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553 | ||| || ||| | ||| || || || | ||||| | || |||||| Sbjct 48700 GTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGATTT 48649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718168843918120