Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq546 84.2 2e-11 >seq546 Length=49788 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||| ||| ||||| |||||| ||||| || ||||| | || | || ||| Sbjct 30208 ACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTGCGTCCGTCTTCC 30149 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 | |||||| || ||||| || | ||||||||||| |||| | |||||||| || Sbjct 30148 AGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGG 30089 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || || || | | | |||||||| | ||||| || | |||||| ||||| Sbjct 30088 ATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCACTTCCAACGTAATAGTTTTC 30029 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | ||||| ||||| |||||||| Sbjct 30028 CCAGTCAGCGTCTTAACAAAAATTTGCAT 30000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354729462555684