Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq4386 84.2 3e-11 seq3208 84.2 3e-11 >seq4386 Length=3728 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074 ||| || | ||||||||||||| |||||| ||||||||||||||| |||||||||||| | Sbjct 3567 GCCTCCGCCCGGGATTGAACCGGGGACCTTCTGCTTACAAGGCAGATGCTCTACCACTAA 3626 Query 108075 GCTATAGAGGC 108085 || | | |||| Sbjct 3627 GCCACAAAGGC 3637 >seq3208 Length=2557 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074 ||| || | ||||||||||||| |||||| ||||||||||||||| |||||||||||| | Sbjct 1100 GCCTCCGCCCGGGATTGAACCGGGGACCTTCTGCTTACAAGGCAGATGCTCTACCACTAA 1041 Query 108075 GCTATAGAGGC 108085 || | | |||| Sbjct 1040 GCCACAAAGGC 1030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 746116954047920