Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq546 89.7 5e-13 >seq546 Length=49788 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | |||||||| | ||||| | ||| | || || Sbjct 29316 ATGCAGATTTTTGTGAAAACGCTTACTGGAAAGACCATCACTTTGGAAGTTGAGTCTTCA 29375 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || |||||| ||||||||||| || ||||| ||||| Sbjct 29376 GACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 29435 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 ||| | || || | || || |||||||| ||||| | | |||| || || || || Sbjct 29436 CAACGTCTGATCTTCGCTGGAAAACAACTAGAAGACG-GACGAACGCTTGCGGATTACAA 29494 Query 26948 CATTCAAAAAGAATCTAC 26965 |||||| |||||||| || Sbjct 29495 CATTCAGAAAGAATCAAC 29512 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| || || | ||||| ||| | || || | ||| | ||||| Sbjct 29999 AATGCAAATTTTTGTTAAGACGCTGACTGGGAAAACTATTACGTTGGAAGTGGAATCTTC 30058 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || ||||| | || || ||||| ||||||||||| || ||||| || || Sbjct 30059 AGATACTATCGACAATGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCAGACCA 30118 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATA 26946 ||| | || |||| | ||| |||||||| ||||| | | ||| || || || | Sbjct 30119 GCAACGTCTAATTTTTGCCGGTAAACAACTGGAAGACG-GACGCACGCTTGCGGATTACA 30177 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||| ||||| ||||| | |||||||| || Sbjct 30178 ACATTCAGAAAGAGTCTACGCTTCATCTGGTACT 30211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478595788143760