Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq546 86.0 5e-12 >seq546 Length=49788 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || ||||| || || ||||| ||||| | ||| ||| || Sbjct 29999 AATGCAAATTTTTGTTAAGACGCTGACTGGGAAAACTATTACGTTGGAAGTGGAATCTTC 30058 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 || ||| | | |||| || || || || || |||||||| | || || | Sbjct 30059 AGATACTATCG-ACAATGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCAGACC 30117 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||| | || |||| ||| || |||||| | ||||| | || | || ||||| | Sbjct 30118 AGCAACGTCTAATTTTTGCCGGTAAACAACTGGAAGACGGACGCACGCTTGCGGATTACA 30177 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||||| ||||||||||| | ||| |||| Sbjct 30178 ACATTCAGAAAGAGTCTACGCTTCATCTGGT 30208 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || ||||| || || |||||||| || | ||| ||||| Sbjct 29771 AATGCAAATTTTTGTTAAGACGCTGACTGGGAAAACCATAACTTTGGAAGTCGAGTCATC 29830 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||||| || ||||| || || || || || || ||||| | || ||||| Sbjct 29831 GGACACTATT-GACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGAATTCCTCCTGATC 29889 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||| | || || | || || |||||| ||||||| | ||| | || ||||| | Sbjct 29890 AGCAACGTCTGATCTTCGCCGGTAAACAACTAGAAGACGGACGAACGCTTGCGGATTACA 29949 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495 |||| || ||||| || || | || ||||| Sbjct 29950 ACATCCAGAAAGAATCAACGTTGCACTTGGTG 29981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425286287863960