Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq6453 226 4e-54 seq151 217 2e-51 >seq6453 Length=80198 Score = 226 bits (250), Expect = 4e-54 Identities = 422/610 (69%), Gaps = 11/610 (2%) Strand=Plus/Minus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 |||||| |||||| || || || ||||| || || || | ||| || | || || |||| Sbjct 49253 ACATCAGACATGCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAA 49194 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 | ||||| ||||| | || || || || ||||||||||| || ||| |||||||| Sbjct 49193 AGCAAAGTCCAGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCG 49135 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 || || || |||||||| || ||||||||||| | | ||| ||| || | ||| Sbjct 49134 GAGAAAAAGATTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATAC 49075 Query 32832 TCATGTATC-CACT-TTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 32887 | || ||| ||| ||| | ||||| | || || || | || || || ||||| || Sbjct 49074 TT-TGGATCGCACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTC 49016 Query 32888 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 32947 || || | | || | |||||| | |||||| | |||||||||||||| | Sbjct 49015 AATCGCGCATAGTAAATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAA 48956 Query 32948 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGC 33007 ||||| |||||| || || ||||| || || ||||| ||||| || ||||||| ||| Sbjct 48955 CGAATACACTTCCGAGTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGC 48896 Query 33008 CTCGGTAATCTGTACTT--CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCG 33065 || | || || || | ||| ||| || | || | ||||||||| || || || Sbjct 48895 TTCCGGGATTTGAACCTCACTGCTGAAATTCAT--GGCGAGATTTTCATTAACAATCCCA 48838 Query 33066 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT 33125 |||||||||||||| || ||||| || ||||| ||||| | | | || | | || Sbjct 48837 TCACTGGCTGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATA 48778 Query 33126 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 33185 ||| ||| ||||| || || | | ||| | |||||| | |||||||| |||| Sbjct 48777 TTAAGCCAGTCATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCC 48718 Query 33186 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 33245 ||||| || |||||||| | ||| || ||| | ||| || ||||| | ||||| | Sbjct 48717 TCTGCTTTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGG 48658 Query 33246 TTTGGATTTT 33255 || ||||||| Sbjct 48657 TTCGGATTTT 48648 >seq151 Length=34927 Score = 217 bits (240), Expect = 2e-51 Identities = 1401/2241 (63%), Gaps = 38/2241 (2%) Strand=Plus/Plus Query 61880 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 61939 || || |||||||||||||| || || ||||| ||||| |||| |||||||| Sbjct 29175 GTTCGGAGATAGTACATTCCTGTCTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAA 29234 Query 61940 GTTAGTTTGGAATAAC--TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGA 61997 || ||||| | | || |||| || || || || ||||| | |||||||| ||| | Sbjct 29235 GTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTTAGTGATTGACTCTGACAAA 29292 Query 61998 TGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAG 62057 || | ||||| | || |||||||| | | ||||| |||||| |||||||||| | Sbjct 29293 TGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACTG 29352 Query 62058 TTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCAT 62114 |||| || | || | || |||| | | |||| || | ||| || | || Sbjct 29353 TTTTGTACTTTTCTTTCACATGAGAAGGAATTTCAGCGATATTTTGTACGGAACCGCGAT 29412 Query 62115 CTGCCATAATCCTATTCTTGATCTCATCAT-TCCATAATTTTCTCTCGGTTAAAACTCTA 62173 | | || |||| | || | || |||| || || |||| | || |||| Sbjct 29413 CGCGAAGGATTTGATTCCGAACGTC-TGATGTCCACAAATTCATCTCAAT--AAGCTCTT 29469 Query 62174 --AGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATAT 62231 | ||||| || || | | ||||||||||| | || | ||| || | || | Sbjct 29470 CCATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGT 29529 Query 62232 TACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCG 62291 | || |||| || | |||||| ||| || | ||||||||| ||||| || || | Sbjct 29530 TGGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTG 29589 Query 62292 GCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAG 62351 |||| || || | || ||| |||| | |||| || | || ||||| | Sbjct 29590 GCATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAACT 29649 Query 62352 GTTCCCAATTCCAAAGATCCGAC---GGTACAACNNNNNNNNNNNNNNNTTGTAGAATAC 62408 | | ||||| ||| || | || || | || ||| | |||| Sbjct 29650 GCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATAC 29709 Query 62409 CGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCAC 62468 | ||| | ||||| |||| | ||||| ||||| | | || | ||| Sbjct 29710 CTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGAGTTCCCGTGCCAATTCCA 29769 Query 62469 AACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCG 62528 || || | || || |||| || ||||| || || | || || || || | | Sbjct 29770 TGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAG 29829 Query 62529 CTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACAC 62588 | | ||| ||||||||| | | | || | ||||| || || | |||||||| | Sbjct 29830 CAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGC 29889 Query 62589 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAAT 62648 | || || || |||| ||||| || ||| | || ||||| ||||| |||||||||| Sbjct 29890 CGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAATAAT 29949 Query 62649 TAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGA 62708 | | ||| || ||||| ||||||||| | || | ||| | || | | ||| Sbjct 29950 TGAGATCAATGATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTATAATTTTG 30009 Query 62709 GAAAATCAAATCGCCCATCTATTACAAACATGTT--CAATGCAACAGATGCCAGATTACA 62766 ||| | |||| | ||| |||| | || || |||||| | || |||| ||| || Sbjct 30010 CAAACTGAAATT--CTTTCTGATACACAAATTTTGACAATGCGATGGAAGCCAAATTGCA 30067 Query 62767 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 62826 || || || || || | || | || | || || ||| ||| ||||| || | Sbjct 30068 TACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCTTGATCG 30127 Query 62827 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 62886 |||||||| | ||| || ||||| || ||||| || || || ||||| || | Sbjct 30128 AATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAGCATATA 30187 Query 62887 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT-CGAGCCTTTA 62945 || || || || ||||||||| || | ||| || ||| | | | | | |||| Sbjct 30188 CGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA--ATTGCTGGGCTTTG 30245 Query 62946 TTATAGATTT---GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGT 63002 | || || | | |||| ||||| | ||| || || || ||| Sbjct 30246 --ACAGTCTTTCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCAAATTCGC 30303 Query 63003 CTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63062 |||||| | | |||| ||| || | |||||| | || ||| ||| || Sbjct 30304 TTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCATTCTTGGT 30363 Query 63063 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG 63122 || | ||| ||||||||||| ||||| || ||||||||||| ||||| ||||| | Sbjct 30364 TGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAAATCTCGTG 30423 Query 63123 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63182 || ||| || ||||| |||||| || || || ||| | | ||||| | || Sbjct 30424 CTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCAT 30483 Query 63183 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63242 |||| || || | || || || | | || ||| || || || ||||| | || Sbjct 30484 GCCAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGT 30543 Query 63243 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 63302 ||| ||| |||| ||| | || | | |||||||| ||| ||||| || | ||||| | Sbjct 30544 ATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCG 30603 Query 63303 TCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63362 |||| ||||| || ||| |||||||| ||| | || || || || | Sbjct 30604 TCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAATACCGCCAG 30663 Query 63363 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 63422 || || || || | || ||| |||| | ||| || || ||||| || ||| ||||| Sbjct 30664 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCAT 30723 Query 63423 CCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 63482 | |||| | ||||||||| || | |||| | ||| ||||||||||| || | Sbjct 30724 CTTGCATGGATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAA 30783 Query 63483 AGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 63542 || |||| || || ||||| | |||| || | | | ||||| || | | | | Sbjct 30784 GCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGG 30843 Query 63543 AGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTT 63602 || | || | || || || || || || || ||||||| ||| || || || | || Sbjct 30844 CATCCAAATTCTCTTTGTGTATGCCGACAGCCACTCGCATTATCATATGTTGTGGGCGTT 30903 Query 63603 CAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 63662 || | || || | ||||| || ||||| |||| ||||||||| ||||||| Sbjct 30904 CACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAAAGCCAAAAT 30963 Query 63663 AGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGT 63722 ||| ||| |||||||| || ||||| | || ||||| || || | | Sbjct 30964 AGTCGTAATCAAAGTCTCTATCACCGATAATGGCGGAATTGAGAGCTTCTTTGTTCTCCA 31023 Query 63723 TAACTACATCCATGGTAATACTTG--AAATAATAGGAAAATG---TTTCCCATTTTTAGG 63777 |||| | || ||| || ||| | |||| ||| | ||| ||| | Sbjct 31024 TAAC-AATTCGATGCACATCGTTGGCGATTAAT-GGAGCGGGTACTTTGGTGGTTTCGTG 31081 Query 63778 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 63837 || | || ||||| | || |||||| || | ||| ||||| | ||| || Sbjct 31082 CTTATTTTCGTAAAATAA---TTGAATGTTTTCACTGAAGACTTTGTTTGTATTTTTATG 31138 Query 63838 TAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACA 63897 || ||| || | || |||| ||| || | ||| |||| ||||||||||| | || Sbjct 31139 TAAATTGGAAATAGCAATTCGAGCAGCCAATTTGGAGAAATCGGGATGTTGTGTGCTGCA 31198 Query 63898 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATAT 63957 ||||| |||| ||||||| ||||||||| || || || || ||| | Sbjct 31199 GTAAGCTGCGGTTTCTGCTGCCAATTCGTCCAATTCCGATGTGGTGACGCCCGGATACAC 31258 Query 63958 TCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATA 64017 || || || ||| || ||||| | ||||| | | || ||||||||| || Sbjct 31259 GCCAGCAATCACTTTCTGAGATATTTGGACGGGATCAACGTATTCTGTGTTTAAGTTGTA 31318 Query 64018 ACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATT 64077 || | |||| | || || | |||||||| || || |||| ||| || ||| | Sbjct 31319 GCAGAGTTTTGTGATTCGCGCAGTGATTTTGTCGAATTTGACGACTTCTTTTCGTCCGTC 31378 Query 64078 TCGTTTAATGACAAACATTTT 64098 ||||| |||||| ||||||| Sbjct 31379 ACGTTTGATGACATACATTTT 31399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633543822186800