Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq252 86.0 1e-11 >seq252 Length=71148 Score = 86.0 bits (94), Expect = 1e-11 Identities = 144/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 279350 GGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTAC 279409 |||||| ||| | ||||| ||||| | || |||||||| | |||||| || ||| | Sbjct 9256 GGATCTATGTAATTGTGAGTTCTCTTTGGCGTATGGTGGTATGATTCTACTGAACAACGC 9197 Query 279410 CCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAA 279469 ||| | | ||| | || | || ||||||||| ||||| |||||| ||||| Sbjct 9196 CCGGTTGCGTTTGAAGAGAGGACATCGTTATGGTCTCTGTGGTCCAAATGGATGCGGTAA 9137 Query 279470 GAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTC---CTAACGCATC 279526 || || ||| | ||||| || ||||| || ||||||||||||| |||| | Sbjct 9136 ATCAACGCTGATGAGAGCCATCGCTAACGGCCAACTGGAAGGATTTCCGTCTAA---AGA 9080 Query 279527 TGAGGTAAGGACAGTGTATGTAGAGCA 279553 |||| ||| ||| |||| ||| || || Sbjct 9079 TGAGCTAAAGACTGTGTTTGTCGAACA 9053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027690187752853