Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06]
11,133 sequences; 32,990,475 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq1548 109 5e-19
>seq1548
Length=38083
Score = 109 bits (120), Expect = 5e-19
Identities = 182/263 (69%), Gaps = 0/263 (0%)
Strand=Plus/Minus
Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAG 20194
||||| || ||||||||||| || || | |||| || || | || | |||||
Sbjct 4746 GGAAACGGGCGTGGAGTGCGTTCAAGTTGTGCCTGTAGCGGTTCCAAGTGATTCATGTAG 4687
Query 20195 ATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCA 20254
|| ||||||||||| | | |||| |||||| |||||| ||| |||| || || |||
Sbjct 4686 ATATGGGCATCTCCGATCACATGAACAAACTCGCCGGGTTGGAGATCAGTCACGTGTGCA 4627
Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314
| ||| | || || || | ||||| ||||| || || ||||| |||| ||| || ||
Sbjct 4626 ATCATTTTTGTCAAAAGCGCGTAGCTAGCAATATTGAATGGAACGCCCAGACCAATATCA 4567
Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAAC 20374
| || | ||| |||| || || || | || || | || || |||||||| || |
Sbjct 4566 GCGGATCGCTGGTACATTTGGCATGATAATTCCCCATTTGCAACGTAAAATTGGCACATG 4507
Query 20375 AAGTGACAGGGCGGAAGCGCCAT 20397
| |||||||| || | |||||
Sbjct 4506 AGATGACAGGGAGGTAATGCCAT 4484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441311377457720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |