Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq546 95.1 1e-14 >seq546 Length=49788 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/223 (71%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || || || |||||||||||||| ||| ||||||||||||||||| | ||| || || Sbjct 30217 AGACGAAGTACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCG-CAAGCGTGCG 30159 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 |||| |||| ||| || |||||||| || || || ||||| || || | | || Sbjct 30158 TCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTC 30099 Query 34029 TTTGTCCATAATTTTTTGCTT--AATGGAACTC-ACACTATCAGTAGATTCGCATTCGAC 34085 ||||||| || || ||| || | || | | |||| | |||||| ||| | Sbjct 30098 TTTGTCCTGGATCTTCGCCTTCACATTG---TCGATAGTATCTGAAGATTCCACTTCCAA 30042 Query 34086 CGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||| || ||||| || || || || || ||||| ||||||||| Sbjct 30041 CGTAATAGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCATT 29999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397008525208666