Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq151 116 3e-21 seq8657 109 5e-19 seq546 98.7 9e-16 >seq151 Length=34927 Score = 116 bits (128), Expect = 3e-21 Identities = 603/938 (64%), Gaps = 27/938 (3%) Strand=Plus/Minus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAG-AG 123664 || |||||||||||||| ||||| ||||||||||| || || | ||| |||||||| || Sbjct 30202 GAGACCGGAACGCCGTATATGCTTTACAAAGACGCTTGTAATCGTAAATCCAATCAGCAG 30143 Query 123665 CAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGC 123724 | ||||| ||| || || || ||||| |||| ||||| ||||| ||| || | Sbjct 30142 AATCTTGG-AACCATTCGATCAAGCAATCTCTGCTGTGAAATCATCGAGTACTCAGACTC 30084 Query 123725 CGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGC---GTGAATCGTTGCGTCGAAAA 123781 | | ||||||| || || ||||||||||| | | || || || ||| || | | Sbjct 30083 CAAAGAAGTGGCAGTATGCAATTTGGCTTCCA-TCGCATTGTCAAAATTTGTGTATCAGA 30025 Query 123782 CGGCGCTTTTAATTTCCAAACGCTCAAACG-CATAACAAAAACTGTAGTAAAGAATTTGA 123840 | ||| | ||| |||| | | ||| || ||||||| || || ||| | | Sbjct 30024 AAG-AATTTCAGTTTGCAAA--ATTATACGAAATCACAAAAATCGTTACGAAAAATCTCA 29968 Query 123841 ACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAAC 123900 ||||||| || ||| | |||| |||||| | ||||| | || ||| | || Sbjct 29967 ACAAAATCATTGATCTCAATTATTATCCGATTCCTGAAGCACAAGTGAGCAATCAGCGAC 29908 Query 123901 ACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGC 123960 | ||||| | ||| | ||| ||||||| | ||||| ||||| || || || | | | Sbjct 29907 ATCGACCGATTGGAATCGGCGTTCAAGGTCTTGCCGATACGTTTTTACTGATGAGTCTTC 29848 Query 123961 CGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACG 124020 | | |||||| | | || ||| || | |||| ||||| || |||| || Sbjct 29847 CATTTGAAAGCAAAGCTGCTCGCGAGCTCAACAAAGAAATTTTTGAAACGATGTATTTCG 29788 Query 124021 GCGCTTTGGAGGCGAGCTGCGAACTTG--CGAAAATTCACGGCGCGTACGAAAGTTACGC 124078 || |||| || | ||| | | || || | ||| ||||||| || || || Sbjct 29787 CGGCGATGGAAGCTTCCATGGAATTGGCACGGGAA--CTCGGACCGTACGAGAGCTATGC 29730 Query 124079 GGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATG-CTACACCGA--C 124135 || || | || |||||||| || || | || |||||| | | | |||| | Sbjct 29729 TGGATCACCAGTTAGTCGAGGTATCTTTCAATTTGATATGTGGCAGGTCATTCCCGATTC 29670 Query 124136 AAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTC 124195 | ||||| |||| || ||| | | || | || ||||| | || ||||| Sbjct 29669 CGGTCGATGGGATTGGAAGCAGTTGAAAGAGCAAGTAGCTACTCACGGAATCCGAAACTC 29610 Query 124196 GCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATC 124255 || || | || ||||| || || | || ||||||||| | || || ||| || Sbjct 29609 TTTGCTGCTCGCTCCGATGCCAACCGCCTCAACGGCTCAAATTCTCGGCAATTGCGAGTC 29550 Query 124256 CTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCG-ATTTTCAAG 124314 |||||||||||||| ||| ||| | ||||| || | || || | |||| ||| Sbjct 29549 TATCGAGCCGTTCACTTCCAACATGTTCAATCGACGCGTCCTCGCTGGAGAATTTACAAT 29490 Query 124315 TGATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGT--ACGATGAAAACAT 124372 || | || | || | |||| || | | | | | ||||||| || || | || | Sbjct 29489 TG-TCAACAAATATCTCATGGAAGAGCTTATTGAGATGAATTTGTGGAC-AT-CAGACGT 29433 Query 124373 GCGCAACGAAATTATT-GCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAAC 124431 || || |||| || ||| | | || ||| || |||||| ||||| | Sbjct 29432 TCGGAATCAAATCCTTCGCGATC-GCGGTTCCGTACAAAATATCGCTGAAATTCCTTCTC 29374 Query 124432 ACGTCAAGCAACTGTACAAAACCGTGTGGGAAATGAA-AAATAAACGATTAATTGAAATG 124490 | || || || ||||||||| || |||||||| || || | ||||| | || ||| Sbjct 29373 ATGTGAAAGAAAAGTACAAAACAGTTTGGGAAATCAAGCAAAAGGCGATT-TTGGACATG 29315 Query 124491 GCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATC 124528 || | ||| ||||| ||||||| ||| |||||||| Sbjct 29314 GCTGCCGATCGAGGAGCGTACATTTGTCAGAGTCAATC 29277 >seq8657 Length=30266 Score = 109 bits (120), Expect = 5e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 45153 TTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATC 45212 |||||||| || ||||| || ||| || |||||||||||||||||| | ||| Sbjct 25969 TTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAATC 26028 Query 45213 AATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCT 45272 || || || ||||| || ||||| ||||| || |||||||| || || | || Sbjct 26029 AAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTATCG 26088 Query 45273 ACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAA 45332 | ||||||||| || ||||| || ||||| | ||||| ||||| || || || || ||| Sbjct 26089 ATGGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGACGAAA 26148 Query 45333 ATTTGCAT 45340 || ||||| Sbjct 26149 ATCTGCAT 26156 >seq546 Length=49788 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | | ||| | |||| ||||||||| || ||||| || ||||| Sbjct 30001 ATTCCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCC 29942 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || || | |||||| || ||| | |||| |||||||| || || Sbjct 29941 GCAAGCGTTCGTCCGTCTTCTAGTTGTTTACCGGCGAAGATCAGACGTTGCTGATCAGGA 29882 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| ||||| || || || || || || | || | || | ||||| || ||||| Sbjct 29881 GGAATTCCTTCCTTGTCCTGGATCTTCGCCTTCA-CGTTGTCAATAGTGTCCGATGACTC 29823 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| | ||| | ||||| || || || || || |||||||||||||| Sbjct 29822 GACTTCCAAAGTTATGGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCAT 29772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451940298104680