Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq151 161 1e-34 >seq151 Length=34927 Score = 161 bits (178), Expect = 1e-34 Identities = 673/1048 (64%), Gaps = 33/1048 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 |||||| | ||| | ||||| || || ||||||| ||| || | | ||| | || Sbjct 30899 CCCACAACATATGATAATGCGAGTGGCTGTCGGCATACACAAAGAGAATTTGGATGCCGT 30840 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATT---CACGCAACACCAACCCT 75327 ||||| || || || | ||||| ||| | |||| || || ||||| || || || Sbjct 30839 TTTGGAAACGTATGAACACATGTCACAA---AAGTTCTTTACGCATGCAACTCCGACGCT 30783 Query 75328 CTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 75387 |||||||| || || || |||| || | || || || || | ||| | || Sbjct 30782 TTTCAATGCGGGAACGCCTCGACCCCAATTATCGTCGTGTTTTCTATTATCCATGCAAGA 30723 Query 75388 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 75447 || || ||| |||| || || | || || | | |||||| || ||||||||||| Sbjct 30722 TGATTCTATCGACGGCATTTACGACACGCTGAAACAATGTGCGTGTATTTCAAAGTGGGC 30663 Query 75448 TGGGGGTATTGGGAT--GCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 ||| |||||||| | | | |||| || | | ||| || | |||||| ||| Sbjct 30662 TGGCGGTATTGGCGTCAGTATTTCCA--ATATTCGCTCCACCAACAGTTATATTCGCGGG 30605 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || ||||| || |||| ||| ||||||||||||| || || || | |||||| || Sbjct 30604 ACGAATGGAAGTTCGAATGGAATTGTTCCAATGCTTCGGGTGTTCAATGACACAGCTCGA 30545 Query 75566 TATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || || |||||| || | || || ||||| | || | || | || || ||| Sbjct 30544 TACGTTGATCAAGGTGGTGGGAAGCGGAAAGGGTCTTTTGCAATTTATCTAGAGCCCTGG 30485 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 ||||| |||||| | ||||| || || |||| || || || | ||| ||| Sbjct 30484 CATGCGGATATCTTTGAGTTTCTGGAACTACGTAAGAATCATGGAAATGAACTCCATCGA 30425 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 ||||| | |||| | || ||||| || || || || ||||| || || || || Sbjct 30424 GCACGAGATTTATTTTATGCTCTTTGGATCCCCGATCTGTTTATGAAACGTGTGGAAGAC 30365 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 ||||| | | |||||||| || |||| ||| | || | || | |||| Sbjct 30364 AACCAAGAATGGAGTTTATTCTGTCCGAACGAGGCTCCACGACTTTATGAGACA-TGGGG 30306 Query 75803 GAG-GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 || || ||||| || | || |||||| || | | ||| |||||| Sbjct 30305 AAGCGAATTTGATGCGTTATATGAAAAGTACGAGTCTCAAAACATTGCCCGAAAGACTGT 30246 Query 75862 ACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 |||| | | ||| || ||| | | |||| ||||| ||||| || || Sbjct 30245 CAAAGCCCAGCAATTGTGGTTTGCCATTTTGGATAGTCAGATTGAGACCGGAACGCCGTA 30186 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 |||||||||||| || |||||||| || || || ||||| | ||||| || Sbjct 30185 TATGCTTTACAAAGACGCTTGTAATCGTAAATCCAATCAGCAGAATCTTGGAACCATTC- 30127 Query 75982 GAGCTCAA---ATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 | |||| |||| ||| ||||| | |||||| |||| | || ||| || Sbjct 30126 --GATCAAGCAATCTCTGCTGTGAAATCATCGAGTACTCAGACTCCAAAGAAGTGGCAGT 30069 Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGA 76098 ||||||||||| || ||||| | |||| | ||| || | || | | | ||| | Sbjct 30068 ATGCAATTTGGCTTCCATCGCATTGTCAAAATTTGTGTATCA-GAAA---GAA--TTTCA 30015 Query 76099 TTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGA 76158 | || |||| | | ||||||||||| || ||||| |||||||| ||| | ||||||| Sbjct 30014 GTTTGCAAAATTATACGAAATCACAAAAATCGTTACGAAAAATCTCAACAAAATCATTGA 29955 Query 76159 CAGAAATTTTTATCCCGTTGAGACTG-CGCGAAAGT--CTAATATGCGACACAGACCTAT 76215 |||| |||||| || ||| || |||| ||| |||||| |||| || Sbjct 29954 TCTCAATTATTATCCGATT---CCTGAAGCACAAGTGAGCAATCAGCGACATCGACCGAT 29898 Query 76216 TGGTTTGGGTGTTCAAGGTCTCGCGGAT 76243 ||| | || ||||||||||| || ||| Sbjct 29897 TGGAATCGGCGTTCAAGGTCTTGCCGAT 29870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596486579883040