Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq546 131 3e-25 seq8657 96.9 6e-15 seq3466 89.7 9e-13 >seq546 Length=49788 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191 ||||||| | | |||||||||||||| | |||| |||||| ||| || || || | Sbjct 30228 TACCACCACGAAGACGAAGTACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCG 30169 Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251 | ||| | || || | |||||| ||||||||||||| | || || || |||| Sbjct 30168 CAAGCGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAG 30109 Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311 | ||||||||||| || || || || | || | ||| |||||||| ||||| || | Sbjct 30108 GAATTCCTTCTTTGTCCTGGATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCA 30049 Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 |||| | || |||||||| || || ||||| || ||||| ||||||||| Sbjct 30048 CTTCCAACGTAATAGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCATT 29999 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || | ||||| || | ||||| ||| || || || | | ||||| Sbjct 29530 CGAAGCACTAAGTGCAACGTTGATTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCCG 29471 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || |||| ||||||||| || || || | | || ||||||||||| ||||||||||| Sbjct 29470 TCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTG 29411 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || |||| |||| ||| || || || |||||||||||||| | ||| || Sbjct 29410 TCTTGAATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAACTTCCAAAGTGATG 29351 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || |||||||| ||||| || ||||| Sbjct 29350 GTCTTTCCAGTAAGCGTTTTCACAAAAATCTGCAT 29316 Score = 109 bits (120), Expect = 1e-18 Identities = 167/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||| | | || || |||| ||||| || | ||||| || || Sbjct 30008 AATTTGCATTCCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTT 29949 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || | | ||||| || |||| |||||| ||||| || || | | || || Sbjct 29948 GTAATCCGCAAGCGTTCGTCCGTCTTCTAGTTGTTTACCGGCGAAGATCAGACGTTGCTG 29889 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| |||||||| || || || || || | || | || |||||| || || Sbjct 29888 ATCAGGAGGAATTCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCCGA 29829 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| ||||| | |||||| ||||| || || ||||| || ||||| ||||||||| Sbjct 29828 TGACTCGACTTCCAAAGTTATGGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCATT 29771 Score = 105 bits (116), Expect = 1e-17 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || |||| ||||||||| || || || | | || ||||||||||| |||||||| || Sbjct 29698 TCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTG 29639 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | || | || |||||| || || ||||| ||||| | ||||||| Sbjct 29638 TCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCTGATGACTCTACTTCCAAAGTTATA 29579 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| || || | ||||| |||||||| |||||| Sbjct 29578 GTTTTTCCAGTCAAGGTTTTCACAAATATCTGCATT 29543 >seq8657 Length=30266 Score = 96.9 bits (106), Expect = 6e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || ||||||||||| || ||||| || | |||||| || ||||| |||||||| || Sbjct 26002 TCCTCCAATTGTTTTCCTGCGAAAATCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTG 26061 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || | || | ||| || || ||||| || || || || ||||| || Sbjct 26062 TCTTGAATCTTCGCCTTCACATTATCGATGGTGTCGGATGATTCGACCTCAAGAGTGATT 26121 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| || || || || || || || || |||||| Sbjct 26122 GTTTTCCCGGTGAGTGTCTTGACGAAAATCTGCATT 26157 >seq3466 Length=44099 Score = 89.7 bits (98), Expect = 9e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||||||||||||||||| | ||||| |||||||| |||||||| || Sbjct 36118 TCTTCAAGTTGTTTTCCGGCAAAAATTAGACGTTGTTGGTCAGGAGGAATTCCTTCCTTG 36059 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || ||| | || | ||| ||| || || | || || ||||| || || || Sbjct 36058 TCTTGAATCTTGCTCTTGACATTGTCAATCGTGTCCGCTGATTCTACTTCGAGTGTAATT 35999 Query 193326 GTTTTACCTGTT 193337 ||||| ||| || Sbjct 35998 GTTTTTCCTATT 35987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899529201844560