Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq546 118 1e-21 seq3466 96.9 3e-15 >seq546 Length=49788 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||| ||| | |||||||| || || || || || || | ||||| || | Sbjct 29313 ACCATGCAGATTTTTGTGAAAACGCTTACTGGAAAGACCATCACTTTGGAAGTTGAGTCT 29372 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | ||||| ||||| ||||||||||||||||| ||||| ||| Sbjct 29373 TCAGACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCTGAT 29432 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || |||||| ||||||| || || ||||| || || || ||| | | ||||| Sbjct 29433 CAGCAACGTCTGATCTTCGCTGGAAAACAACTAGAAGACGGACGAACGCTTGCGGATTAC 29492 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||||||| || ||||| || | ||||| ||| Sbjct 29493 AACATTCAGAAAGAATCAACGTTGCACTTAGTG 29525 Score = 118 bits (130), Expect = 1e-21 Identities = 155/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| ||||| || || |||||||||||| | ||||| ||| | | Sbjct 30000 ATGCAAATTTTTGTTAAGACGCTGACTGGGAAAACTATTACGTTGGAAGTGGAATCTTCA 30059 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| |||||||||||||| ||||| || || Sbjct 30060 GATACTATCGACAATGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCAGACCAG 30119 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880 |||||| | || |||||||| ||||| ||||| || || || || | | ||||| Sbjct 30120 CAACGTCTAATTTTTGCCGGTAAACAACTGGAAGA--CG-GACGCACGCTTGCGGATTAC 30176 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| || || || || || || |||| Sbjct 30177 AACATTCAGAAAGAGTCTACGCTTCATCTGGT 30208 >seq3466 Length=44099 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAG 24790 || ||||| ||||| |||||||||||| | | ||||| | || | || || ||| Sbjct 35991 GGAAAAACAATTACACTCGAAGTAGAATCAGCGGACACGATTGACAATGTCAAGAGCAAG 36050 Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 || |||||||| |||||||| ||||| || ||||||||| | || |||||||| ||||| Sbjct 36051 ATTCAAGACAAGGAAGGAATTCCTCCTGACCAACAACGTCTAATTTTTGCCGGAAAACAA 36110 Query 24851 CTGGAGGA 24858 || || || Sbjct 36111 CTTGAAGA 36118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449834991125240