Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq546 113 5e-20 seq8657 111 2e-19 seq151 95.1 1e-14 >seq546 Length=49788 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || ||||| || || || ||||||||||| || ||| ||| | ||| || Sbjct 30208 ACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTGCGTCCGTCTTCC 30149 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || ||||| || |||||||| | ||| ||||| || || || || |||||||| || || Sbjct 30148 AGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGG 30089 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | || || || |||||||| || | ||||| ||||| Sbjct 30088 ATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCACTTCCAACGTAATAGTTTTC 30029 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || | || ||||| |||||||||||| Sbjct 30028 CCAGTCAGCGTCTTAACAAAAATTTGCATT 29999 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | ||| | ||| | ||| ||||| || ||||||||||| || Sbjct 29544 TTCCACCACGGAGGCGAAGCACTAAGTGCAACGTTGATTCTTTCTGAATGTTGTAATCCG 29485 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| || | ||| || || ||||| || || || |||| ||| |||||||| || | Sbjct 29484 CAAGCGTTCGTCCGTCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAG 29425 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || |||||||| |||||||| || || || || | ||||| || || || | Sbjct 29424 GAATTCCTTCTTTGTCTTGAATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAA 29365 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | ||| ||||| || || || | ||||| || ||||| ||||| Sbjct 29364 CTTCCAAAGTGATGGTCTTTCCAGTAAGCGTTTTCACAAAAATCTGCAT 29316 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | || || | ||| | ||| | ||| ||||| || || |||||||| || Sbjct 30000 TTCCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCG 29941 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| || | ||| || || ||||| || || || |||| ||| |||||||| || | Sbjct 29940 CAAGCGTTCGTCCGTCTTCTAGTTGTTTACCGGCGAAGATCAGACGTTGCTGATCAGGAG 29881 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || || || || || || || ||| | ||||| || || || | Sbjct 29880 GAATTCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCCGATGACTCGA 29821 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || | ||| |||||||| || || | || ||||| |||||||||||| Sbjct 29820 CTTCCAAAGTTATGGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCATT 29771 >seq8657 Length=30266 Score = 111 bits (122), Expect = 2e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 134526 TTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATC 134585 ||||| |||||||| || | | || | ||| || | ||||| ||||| |||||| Sbjct 25969 TTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAATC 26028 Query 134586 AAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCC 134645 |||||||| || ||||| || || ||||| || |||||||| || || || || Sbjct 26029 AAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTATCG 26088 Query 134646 AATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 | |||||||| ||||| || || ||||| || ||||| ||||| | || || |||||| Sbjct 26089 ATGGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGACGAAA 26148 Query 134706 ATTTGCATT 134714 || |||||| Sbjct 26149 ATCTGCATT 26157 >seq151 Length=34927 Score = 95.1 bits (104), Expect = 1e-14 Identities = 459/717 (64%), Gaps = 31/717 (4%) Strand=Plus/Minus Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292 |||||| | || |||| | || ||||| | |||||| ||||| |||||||||||||| Sbjct 30223 GCCATTTTGGATAGTCAGATTGAGACCGGAACGCCGTATATGCTTTACAAAGACGCTTGT 30164 Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352 || ||| |||||| || | || |||||| | | |||||||| ||| |||| Sbjct 30163 AATCGTAAATCCAATCAGCAGAATCTTGGAACCATTCGATCAAGCAATCTCTGCTGTGAA 30104 Query 8353 ATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTG----TG 8408 || | ||||| | || | |||||||| || |||||| | || || | || Sbjct 30103 ATCATCGAGTACTCAGACTCCAAAGAAGTGGCAGTATGCAATTTGGCTTCCATCGCATTG 30044 Query 8409 TTTAAACGCGTTCGTTGATCGACGCTCAAACACTTACGACTTTGAACAATTGAAAAACGC 8468 | ||| || || ||| ||| | || | | |||| | |||| | ||| Sbjct 30043 TCAAAA----TTTGTGTATCAG-----AAAGAATTTC-AGTTTGCAAAATT---ATACGA 29997 Query 8469 CGTG-CAAGTGACGGTACGCAA--TTTAGATCGCATCATTGATGTCAATTTTTATCCCTT 8525 | ||| || |||| || | | | ||||||||| |||||| |||||| | Sbjct 29996 AATCACAAAAATCGTTACGAAAAATCTCAACAAAATCATTGATCTCAATTATTATCCGAT 29937 Query 8526 GGAAGAAGCGCGCGT-ATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTC 8584 ||||| | || | | | || ||| || |||| |||| | ||||| ||||||| Sbjct 29936 TCCTGAAGCACAAGTGAGCAATCA-GCGACATCGACCGATTGGAATCGGCGTTCAAGGTC 29878 Query 8585 TGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCA 8644 | ||||| ||||| || || | || || | |||||| ||| || ||| ||||| Sbjct 29877 TTGCCGATACGTTTTTACTGATGAGTCTTCCATTTGAAAGCAAAGCTGCTCGCGAGCTCA 29818 Query 8645 ACATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCC 8704 ||| | |||| |||||| |||||| || || | ||||| | || | || | Sbjct 29817 ACAAAGAAATTTTTGAAACGATGTATTTCGCGGCGATGGAAGCTTCCATGGAATTGGCAC 29758 Query 8705 GAGAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAAT 8764 | ||| | || ||||||| || || || || | || || || || || |||| Sbjct 29757 GGGAACTCGGACCGTACGAGAGCTATGCTGGATCACCAGTTAGTCGAGGTATCTTTCAAT 29698 Query 8765 ACGACATGTGGAATGTCACGCCCACCTCT--TTG-TGGAATTGGAGCGATTTGAAAC-GC 8820 || |||||| | |||| ||| || | | ||| |||||| | |||||| || Sbjct 29697 TTGATATGTGGCAGGTCATTCCCGATTCCGGTCGATGGGATTGGAAGCAGTTGAAAGAGC 29638 Query 8821 AA--AATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCA 8878 || | | |||| ||| | || || || || || | ||| ||||| |||||| Sbjct 29637 AAGTAGCTACTCA---CGGAATCCGAAACTCTTTGCTGCTCGCTCCGATGCCAACCGCCT 29581 Query 8879 CGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGT 8935 | || |||||||| | || || ||| || | ||||||||||| |||| ||| Sbjct 29580 CAACGGCTCAAATTCTCGGCAATTGCGAGTCTATCGAGCCGTTCACTTCCAACATGT 29524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505328067495160