Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq2387 86.0 9e-12 >seq2387 Length=181654 Score = 86.0 bits (94), Expect = 9e-12 Identities = 357/559 (64%), Gaps = 6/559 (1%) Strand=Plus/Plus Query 161167 ACCTGATGAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAACC 161226 |||| |||| || || | |||| || | |||||| |||||| || ||| || Sbjct 50956 ACCTCATGAAATATATAGTTTAGGTGCGCTCTCTCATGTACGAGTATCCTTTGAGTTGCC 51015 Query 161227 TGAATATACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTC- 161285 ||||| || || | |||| || || || ||| || ||||| | ||||| Sbjct 51016 AGAATACACTGCCGATGTGAATGCACTCGGCACTCTACGATTATTGAATTGTATTCGTAC 51075 Query 161286 -TCCTAGGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGG 161344 | | || ||| ||| | ||| || | || || || ||||| |||||| | || ||| Sbjct 51076 ATGCAAG--ATGGAAGACACGGTGCGGTTTTATCAAGCTTCCACGAGTGAGCTCTACGGG 51133 Query 161345 TTGGTACAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGC 161404 | | ||| || ||||| || ||| || ||| ||||| |||||||| || || Sbjct 51134 AACGCTCGAGAAACGCCACAAAATGAACAGACGGTTTTTTACCCGCGATCTCCGTACGGT 51193 Query 161405 GTAGCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCAC 161464 || || || | | || ||||||| || || |||||||| ||| || Sbjct 51194 GTTGCAAAGCAATTTGCATATTGGTCGGTCGTTAATTACAGAGAAGCATATAAAATATTT 51253 Query 161465 GCCAGT-AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAAC 161523 || ||| | ||| || |||| || || ||| ||||| ||||| || ||||| || Sbjct 51254 GC-AGTGAATGGAATCTTATTTAATCACGAGAGTCCACGCCGGGGGCTAACGTTCGTGAC 51312 Query 161524 CCGTAAGATTACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCT 161583 || |||||||| | | | || || | | ||| || ||||| ||||| || Sbjct 51313 TCGCAAGATTACCCGCGCGGTTGTACGCATCAATGAAGGGTATCAAGATTGCCTATATCT 51372 Query 161584 AGGTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTG 161643 || ||| | | | | |||||| ||||||||||| ||||||||| || |||||| Sbjct 51373 TGGAAATTTGGATGCTAAACGAGACTGGGGTCATGCAAGAGACTATGTCGAATGTATGTG 51432 Query 161644 GTTGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATTC 161703 | ||| | || || | |||| | || | ||| | || ||||| ||| | |||| Sbjct 51433 GAGAATGATGCAGCATAATGATCCTCAAGATTTTGTCGTGGCTACAGGAGAAGCGCATTC 51492 Query 161704 AGTGAAGGACTTTGTAGAG 161722 || || ||||| ||| Sbjct 51493 GGTCCGTGAGTTTGTGGAG 51511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729828021172040