Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq151 291 1e-73 seq6453 273 3e-68 >seq151 Length=34927 Score = 291 bits (322), Expect = 1e-73 Identities = 1187/1852 (64%), Gaps = 44/1852 (2%) Strand=Plus/Plus Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462 ||| || ||||||||||| || || || |||||| ||||| ||||||||||||| Sbjct 29174 TGTTCGGAGATAGTACATTCCTGTCTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGA 29233 Query 68463 TGTTAGTTTGGAATAAC--TTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCG 68520 || ||||| | | || | || ||||| || |||||||| | |||||||| ||| Sbjct 29234 AGTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTTAGTGATTGACTCTGACAA 29291 Query 68521 ATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATA 68580 ||| | ||||||| ||| || ||||| | | ||| |||||| |||||||||| Sbjct 29292 ATGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACT 29351 Query 68581 GTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCA 68637 || || | | | ||| | || | |||| | ||||||| | ||| || | | Sbjct 29352 GTTTTGTACTTTTCTTTCACATGAGAAGGAATTTCAGCGATATTTTGTACGGAACCGCGA 29411 Query 68638 TCGGATATAATTATATTCTTGATCTCATCAT-TCCACAATTTTCTCTCCGTTAAAACTCT 68696 ||| | ||| |||| | || | || ||||||| || |||| | || |||| Sbjct 29412 TCGCGAAGGATTTGATTCCGAACGTC-TGATGTCCACAAATTCATCTCAAT--AAGCTCT 29468 Query 68697 A--AGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATA 68754 | ||||| || || ||| |||||| |||| | || | ||| || | || Sbjct 29469 TCCATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATG 29528 Query 68755 TTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTT 68814 || || | || || | ||| || ||| || ||||||||||| ||||| || ||| Sbjct 29529 TTGGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTT 29588 Query 68815 GGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGA 68874 ||||| || || | || ||| |||| | || || || | || ||||| | Sbjct 29589 GGCATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAAC 29648 Query 68875 TGTTTCCAATCCCAAAGATCAGAT---GGTACAACATTCCAAAGATCGTATTGTAGAATT 68931 || ||||||||||| || | || || | || | ||| | ||| |||| | || Sbjct 29649 TGCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATA 29708 Query 68932 CCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCC---TTCCTGTTCAGCTAGT 68988 || ||| | ||||||| ||| | || || ||||| |||| || || | | Sbjct 29709 CCTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGAGTTCCCGT---GCCAAT 29765 Query 68989 TCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 69048 || || || | || || |||| || ||||| ||||| | || ||||| || Sbjct 29766 TCCATGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCG 29825 Query 69049 TGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGA 69108 | || || || || |||||| | | || | ||| | ||| || | || ||| Sbjct 29826 CGAGCAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGA 29885 Query 69109 ACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAA 69168 || || || || || |||| ||||| || ||| || ||||| ||||| |||||| Sbjct 29886 ACGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAA 29945 Query 69169 TAATTAATATCTATAATTTTATTAAGATTT--CGGACTACTACTTTAACCACGTCCTTTA 69226 ||||| | ||| || ||||| || |||||| || | || | ||| | || | || Sbjct 29946 TAATTGAGATCAATGATTTTGTTGAGATTTTTCGTA--ACGATTTTTGTGATTTCGTATA 30003 Query 69227 GTTTGAGAAAATCAAATCGTCCATCTATAACAAACATATT--CAGTGCTACAGATGCTAG 69284 ||| ||| | |||| || ||| ||| | || || || ||| | || || | Sbjct 30004 ATTTTGCAAACTGAAAT--TCTTTCTGATACACAAATTTTGACAATGCGATGGAAGCCAA 30061 Query 69285 ATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACT 69344 ||| || ||||| || || || || | || || | || || || || ||||| || Sbjct 30062 ATTGCATACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCT 30121 Query 69345 ACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAG 69404 || || || || ||||| |||||||| || ||||| ||||| |||||||| Sbjct 30122 TGATCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAG 30181 Query 69405 AATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGC 69464 ||| |||| || || || ||||||||| || | ||| | ||||| || | || Sbjct 30182 CATATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGG-----CAAACCACAATTGC 30236 Query 69465 ATTTATT--ACGGTCTT----GTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTC 69518 || || ||||| | || | || | || || | | ||||| | || Sbjct 30237 TGGGCTTTGACAGTCTTTCGGGCAATGTTT-TGAGACTCGTACTTTTCATATAACGCATC 30295 Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578 ||||| |||||| |||| | || ||| || || ||||| | || ||| Sbjct 30296 AAATTCGCTTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCA 30355 Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAG 69638 | | | || | || ||||||||||| |||||||| ||||||||||| ||| | Sbjct 30356 TTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAA 30415 Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698 ||||| | || || ||||||||| ||| || || || |||||||| | || Sbjct 30416 ATCTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGAT 30475 Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGC-CATGACTCCCGGTCGTTTATTTCCTCCCT 69757 ||| | |||||| || |||||||| || || | ||| || || || || || | Sbjct 30476 ATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGAC-CCTTTCCGCTTCCCACCACCTT 30534 Query 69758 GATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATT 69817 |||| | ||||| || |||| ||| | || | ||||| |||| ||| ||||| || Sbjct 30535 GATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAAC 30594 Query 69818 TACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTA 69877 | ||||| || || ||||||||| | | ||||||||| |||| | || | Sbjct 30595 TTCCATTCGTCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAA 30654 Query 69878 TTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTA 69937 | || || ||| || || || ||||| |||||| ||||| || || || || | Sbjct 30655 TACCGCCAGCCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGA 30714 Query 69938 TGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCG 69997 | ||||||| |||| | |||||||| || | ||| | | ||||||| Sbjct 30715 TAGAATCATCTTGCATGGATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCG 30774 Query 69998 CATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTT 70057 |||| || | || |||| ||| || || || | |||| || | | | || |||| Sbjct 30775 CATTGAAAAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTT 30834 Query 70058 CAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCT 70117 | | | | | || | || | | || || || | || || ||||| | |||||| | Sbjct 30835 CCAAAACGGCATCCAAATTCTCTTTGTGTATGCCGACAGCCACTCGCATTATCATATGTT 30894 Query 70118 GAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAA 70177 | || ||||| | ||| ||| | |||||| || ||||| ||||||||||||| Sbjct 30895 GTGGGCGTTCACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAA 30954 Query 70178 ACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229 | |||||||||| ||| ||||||||| || ||||| | ||||| || Sbjct 30955 AGCCAAAATAGTCGTAATCAAAGTCTCTATCACCGATAATGGCGGAATTGAG 31006 >seq6453 Length=80198 Score = 273 bits (302), Expect = 3e-68 Identities = 610/899 (68%), Gaps = 35/899 (4%) Strand=Plus/Minus Query 39332 TATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATG 39391 ||||| |||||||||||||| ||||| || ||||| |||| || || || | ||||| Sbjct 49530 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCATC 49471 Query 39392 AAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTC-TGAAATCAATCT 39450 | ||||| ||||||| || | |||| || | | || | | | || || ||||| Sbjct 49470 CAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGCCAAGTGCATGTAA-CAATCG 49412 Query 39451 ATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAAC 39510 ||| || ||||| || |||||| ||||| |||||||||| || || | || Sbjct 49411 ATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGAC 49352 Query 39511 TGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG-ATG 39569 ||| || | || || ||| |||| ||||||| ||||| || | || || | ||| Sbjct 49351 TGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCATG 49292 Query 39570 TTACTACCTCATCACTCGGTGGATGCAA---TAAATGTTTAAA---CATTAAGCAGGCGA 39623 | || | | || |||| || || |||| | ||| | || || | Sbjct 49291 --AATAGAGCCT---TC--TGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAA 49239 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 ||||||||||||| || ||||| | ||| || | || || ||||| |||||||||| Sbjct 49238 AGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCA 49179 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA-AAAGATCCAGAAAAGAAGATGCCT 39742 | | || || || || ||||||||||| | |||| || ||||| || || ||||| ||| Sbjct 49178 TCAATCCTCGTTTCTTCAGCCAAAATATAG-AGCAGAATGATCCGGAGAAAAAGATTCCT 49120 Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTAT----CCA 39798 || || || ||||| || || | ||| ||| | ||| | | | || || ||| Sbjct 49119 TCGACGGCCGCAAAGGCTACCACTCTTTCTGC-AAACGAGGCATACTTTGGATCGCACCA 49061 Query 39799 CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 ||| ||||| | ||||| || | || || || |||||||| || || | | Sbjct 49060 TTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCATAGTAA 49001 Query 39859 ATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGA 39918 || |||||||| |||||| | |||||||| || || | ||||| ||| || Sbjct 49000 ATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGA 48941 Query 39919 ATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTAC 39978 || || ||||| || || || || ||||| ||||| |||| ||||| | ||||| || Sbjct 48940 GTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGATTTGAAC 48881 Query 39979 CT--CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAA 40036 || ||| ||| || | || | ||||||||| || || |||||||| || ||||| Sbjct 48880 CTCACTGCTGAAATTCAT--GGCGAGATTTTCATTAACAATCCCATCACTGGCTGCAAAG 48823 Query 40037 AATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGT-CAATTTATT---CCAGTC 40092 || ||||| || ||||| ||||| | | | |||| ||| | || |||| |||||| Sbjct 48822 AAGGCCAACACGTGTTTGATAAAGTGTCTCTCAT----TGTCCGATATATTAAGCCAGTC 48767 Query 40093 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTT 40152 ||| || || | | ||| | |||||| || |||||||| |||||||| || || Sbjct 48766 ATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTT 48707 Query 40153 GTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGAtttt 40211 ||||||| ||| || ||| | |||||| ||||| | ||||| | || ||||||| Sbjct 48706 ATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGATTTT 48648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686813208054120