Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq151 158 2e-33 >seq151 Length=34927 Score = 158 bits (174), Expect = 2e-33 Identities = 677/1053 (64%), Gaps = 43/1053 (4%) Strand=Plus/Plus Query 111052 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAG--ACTTTCGC 111109 ||| || ||||||||||| || | ||||| |||| |||||| ||| |||| || Sbjct 29870 ATCGGCAAGACCTTGAACGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGC 29929 Query 111110 G-CAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 111168 ||| || |||||| |||| ||||||| | ||| |||||||| ||||| || Sbjct 29930 TTCAGG---AATCGGATAATAATTGAGATCAATGATTTTGTTGAGATTTTTCGTAACGAT 29986 Query 111169 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT 111228 ||||||||||| | | |||| || | | ||| | | | ||| || ||| | || Sbjct 29987 TTTTGTGATTTCGTATAATTTTGCAAACTGAAA--TTC---TTTCTG-ATACACAAATTT 30040 Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 || | ||||| || ||||||||||| || ||| || | |||| |||||| | Sbjct 30041 TGACAATGCGATGGAAGCCAAATTGCATACTGCCACTTCTTTGGAGTCTGAGTACTCGAT 30100 Query 111289 AATTTCTGTACATAAGTTG---GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTT 111345 ||||| || | ||| || | ||| || || | ||||| || || || Sbjct 30101 GATTTCACAGCAGAGATTGCTTGATCG---AATGGTTCCAAGATTCTGCTGATTGGATTT 30157 Query 111346 CTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAG 111405 || || || || ||||| ||||| || ||||| || ||||| |||| | | Sbjct 30158 ACGATTACAAGCGTCTTTGTAAAGCATATACGGCGTTCCGGTCTCAATCTGACTATCCAA 30217 Query 111406 AATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTT--GGCCCGTCCCTCCGCCTCG 111463 ||| || ||| | | |||| ||| | | || ||| | | |||| Sbjct 30218 AATGGCAAACCACAATTGCTGGGCTTTGACAGT--CTTTCGGGCAATGTTTTGAGACTCG 30275 Query 111464 TACTTTGTGTAGAGGGCTTCAAACTC-CTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 111522 |||||| || | || ||||| || || |||| | || | || | ||| |||| Sbjct 30276 TACTTTTCATATAACGCATCAAATTCGCTTCCCCATGTC-TCATAAAGTCGTGGAGCCTC 30334 Query 111523 GTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGG 111582 || |||||||| | | ||||| || || || || ||||| || || || || Sbjct 30335 GTTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGG 30394 Query 111583 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 111642 ||||| || | |||| | ||||| ||| ||| | || || || || Sbjct 30395 GATCCAAAGAGCATAAAATAAATCTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACG 30454 Query 111643 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC 111702 || || || ||||| | ||||||||| ||||| ||||| ||||| | ||| | ||| || Sbjct 30455 TAGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGA-CC 30513 Query 111703 CTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 111756 ||||| ||| ||| |||||| || || || |||||| | || || || ||||| Sbjct 30514 CTTTC--CGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGAAG 30571 Query 111757 CATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCT 111816 |||||||| ||| |||| || ||||| ||||| |||||| | || ||| | Sbjct 30572 CATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGTTGGTGGAGCG 30631 Query 111817 CACATCATGGATGTGC--ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 111874 | || |||| | | | |||||||| |||||||||||||| || |||||| | Sbjct 30632 AATAT--TGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATTGT 30689 Query 111875 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 111934 | || || | || || |||| ||| || || || | ||| | || || || Sbjct 30690 TTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAAAACACGAC 30749 Query 111935 GACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG---AATGAAC 111991 || | || |||| || || || |||||||| || || || ||||| || || |||| Sbjct 30750 GATAATTGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCGTAAAGAAC 30809 Query 111992 ATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATG 112051 | ||| ||||| | || || || ||||| || | ||| | | || ||| ||| Sbjct 30810 TT---TTGTGACATGTGTTCATACGTTTCCAAAACGGCATCCAAATTCTCTTTGTGTATG 30866 Query 112052 CCGATTGCGACCCGCATGAACATGTACTGTGGG 112084 |||| || || ||||| | ||| | |||||| Sbjct 30867 CCGACAGCCACTCGCATTATCATATGTTGTGGG 30899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627944601496800