Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq1548 89.7 4e-13 >seq1548 Length=38083 Score = 89.7 bits (98), Expect = 4e-13 Identities = 181/269 (67%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 111667 AGTTTTGGAAAGGGGGTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTT 111726 ||| ||||||| ||| || | || ||| ||| |||| || | | |||||| Sbjct 4752 AGTGTTGGAAACGGGCGTGGAGTGCGTTCAAGTTGTGCCTGTAGCGGTTCCAAGTGATTC 4693 Query 111727 AAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATG 111786 | || | ||| |||||||| || ||| | || || | || | | | |||| | | Sbjct 4692 ATGTAGATATGGGCATCTCCGATCACATGAACAAACTCGCCGGGTTGGAGATCAGTCACG 4633 Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846 ||||||||||| | ||| | || ||| |||||||| || ||||| || || || || Sbjct 4632 TGTGCAATCATTTTTGTCAAAAGCGCGTAGCTAGCAATATTGAATGGAACGCCCAGACCA 4573 Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGA 111906 ||||| | |||| || || | || ||||||| || | || || |||||||| Sbjct 4572 ATATCAGCGGATCGCTGGTACATTTGGCATGATAATTCCCCATTTGCAACGTAAAATTGG 4513 Query 111907 CAAAGTACATGACAAGGAGGCAATGCCAT 111935 || | | |||||| ||||| |||||||| Sbjct 4512 CACATGAGATGACAGGGAGGTAATGCCAT 4484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391892419473679