Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq6453 212 5e-50 >seq6453 Length=80198 Score = 212 bits (234), Expect = 5e-50 Identities = 597/903 (66%), Gaps = 18/903 (2%) Strand=Plus/Minus Query 4244 ACAAACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTC 4303 || ||||||| |||| ||||| || || || || || || || ||||| |||| Sbjct 49549 ACCAACACCAGATTTCGCATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTG 49490 Query 4304 TAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACT 4362 | ||||| | ||||| | ||||| ||||||| |||| || | || | || | Sbjct 49489 CAGAGAAATCATATCCATCCAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGCC 49430 Query 4363 TTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGT 4422 || || | |||||| || || ||||| || || || || | ||| | | | Sbjct 49429 A-AGTGCATGTAACAATCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAAT 49371 Query 4423 TAATTCCAATTAATCTC-ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACG 4481 | |||||||||| ||| || || || | | | | ||| |||||||| || | ||| Sbjct 49370 TCATTCCAATTAG-CTCGACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACG 49312 Query 4482 GCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAA-A 4540 || || | || || | | || ||| | | |||||||| | || || | | Sbjct 49311 GCGTCGGAAATGATTGCATGAATAGAGCCTTCTGGAAGCTTATTTACCA-GTTTCGAGTA 49253 Query 4541 CAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAA 4600 || | ||| ||||| |||||||| | ||||| || | || || || || || ||||| Sbjct 49252 CATCAGACATGCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAA 49193 Query 4601 CGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGA 4660 | ||| ||||| || |||| || || ||||||||||||| | ||||| || || Sbjct 49192 GCAAAGTCCAGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGA 49133 Query 4661 AAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAG-CTGGCTT 4719 || || || ||||| ||||| ||||| ||||| | || | |||||| | ||| Sbjct 49132 GAAAAAGATTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTT 49073 Query 4720 TGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779 || | | |||||| || ||||| | ||||| || |||||||||| ||||| | | Sbjct 49072 TGGATCGCA-CCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAA 49014 Query 4780 TAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 | ||| | ||| | |||||| ||| |||| || || || || || | || Sbjct 49013 TCGCGCATAGTAAATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACG 48954 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 ||||| ||| || |||||||||||||| ||||| || ||||| |||||||||| ||||| Sbjct 48953 AATACACTTCCGAGTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTT 48894 Query 4900 CTGTTACTTGAACTTCGTTAC--AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTC 4957 | | | |||||| || | | ||| || | | | ||||| || || || || || Sbjct 48893 CCGGGATTTGAACCTCACTGCTGAAATTCAT--GGCGAGATTTTCATTAACAATCCCATC 48836 Query 4958 ACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGT---ACTGTTCGTCAGGCTTAAG 5014 |||||||||||| || ||||| || || ||||||| || | ||| | || Sbjct 48835 ACTGGCTGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATA-- 48778 Query 5015 TTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGC 5074 || ||||| || || | ||||| | |||||| | |||||||| || Sbjct 48777 -TTAAGCCAGTCATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGC 48719 Query 5075 TTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 || ||||| || ||||| |||||| |||| | || ||||||| || |||||| | Sbjct 48718 CTCTGCTTTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCG 48659 Query 5135 GTT 5137 ||| Sbjct 48658 GTT 48656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426991656442289