Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq693 116 8e-21 seq10289 96.9 7e-15 >seq693 Length=24918 Score = 116 bits (128), Expect = 8e-21 Identities = 129/172 (75%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 319854 AGAGGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGC 319913 ||| || || ||||| || |||||||| | || || | |||||| ||||||||||| Sbjct 7695 AGACGGAAATCCTTCCAGTTGGCCGTTAGCGATGGCTCTCATCAGCGTTGATTTACCGCA 7636 Query 319914 CCCGTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTT 319973 || ||||| ||||| ||||| || || | ||| | |||| ||||| | |||||| Sbjct 7635 TCCATTTGGACCACAGAGACCATAACGATGTCCTCTCTTCAAACGCAACCGGGCGTTGTT 7576 Query 319974 CAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCC 320025 ||| ||||| | |||||||| |||| ||| || ||||||| ||| |||||| Sbjct 7575 CAGTAGAATCATACCACCATACGCCAAAGAGAACTCACAATTACATAGATCC 7524 >seq10289 Length=244 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| |||||||||||| |||||||||| ||||| || |||| ||||||||||||||||| Sbjct 1 GCCTGTCTAGCTCAGTTGGTAGAGCGCAAGACTCTTGATCTTGTGGTCGTGGGTTCGAGG 60 Query 165770 CCCACGATGGGCA 165782 |||||| |||||| Sbjct 61 CCCACGGTGGGCA 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057662321849270