Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3366 228 8e-55 >seq3366 Length=157547 Score = 228 bits (252), Expect = 8e-55 Identities = 582/873 (67%), Gaps = 22/873 (3%) Strand=Plus/Plus Query 16679 TAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATG 16738 || || | ||||||||| || |||||||| ||||| || | ||||| || | ||||| Sbjct 38970 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCATC 39029 Query 16739 AAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTA 16798 | ||||| ||||||| ||| | ||| || | || ||| | | |||| | Sbjct 39030 CAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGCCAAGTGCATGTAACAATCGA 39089 Query 16799 TCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC 16858 ||||| ||||| || || ||||| | ||| || | |||||||| || || || Sbjct 39090 TCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGACT 39149 Query 16859 GGAAGAGCTTC-CGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 ||||| | || ||| ||| || ||| || || | ||| || || ||| || | Sbjct 39150 GGAAGTGAATCTCGTACAAATTC-TTGTTCGATGATAACGGCGTCGGAAATGATTGCATG 39208 Query 16918 AACTCGTTCCTC--GGACGGTGTATGTTTAAGATGTTTAA--ACATCAGACATGCGAAAT 16973 || | | ||| ||| | | | |||| | || | ||||||||||||| || | Sbjct 39209 AA-TAGAGCCTTCTGGAAGCT---TATTTACCAGTTTCGAGTACATCAGACATGCAAAGT 39264 Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033 | ||||||| ||| || || | ||||| || || || ||||| | || |||||| Sbjct 39265 CACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCA 39324 Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093 |||||||||||| | ||||||||| | | ||| || || || || || || || |||| Sbjct 39325 ATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGA 39384 Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGT-CTTTGTTACGAATCCATTTC 17152 ||| ||||| || | | || ||| || ||| || | ||||| || | ||||||| Sbjct 39385 CGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCA-CCATTTC 39443 Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTC 17212 | |||| | ||||| | | | ||| || ||||| || || | ||| | | Sbjct 39444 AACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCATAGTAAATGC 39503 Query 17213 TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGT 17272 | |||||| | | || | || || ||||| || | || |||| ||| |||||| Sbjct 39504 TGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGT 39563 Query 17273 ATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 || || || || || || || ||||| ||||||||||| ||||||| |||||||| || Sbjct 39564 ATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGATTTGAACCTCA 39623 Query 17333 ACGTAGAA--TCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACG 17390 | ||| || | || |||||||| || || || || || || || || || || | Sbjct 39624 CTGCTGAAATTCAT--GGCGAGATTTTCATTAACAATCCCATCACTGGCTGCAAAGAAGG 39681 Query 17391 CCAATATATGCTTAATGAAATATTTTTC---GTCCGGTGTAAGAACGCGCCAGTCCTTTA 17447 |||| | || || || || | | | || ||||| | || || ||||||| || | Sbjct 39682 CCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATATTAA---GCCAGTCATTCA 39738 Query 17448 AATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACA 17507 || | | ||| | |||||| | ||||||||| || ||| |||| || ||||||| Sbjct 39739 TGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACA 39798 Query 17508 TATTCCAAATATCATTGTATTGTATGGGGAATA 17540 | | |||||| ||| | |||||| || |||| Sbjct 39799 TGTCCCAAATCTCAGATTGTTGTATCGGAAATA 39831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517468427481720