Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq2177 134 1e-26 >seq2177 Length=6073 Score = 134 bits (148), Expect = 1e-26 Identities = 206/294 (70%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 18893 TGTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAA 18952 ||| ||| | | | | ||||| ||| | | | ||||| || || |||| |||||| Sbjct 5037 TGTGATACACAAACTCAAAACTGACCAAAATTGTCGACGTATCATCTTATCCGGTTGGAA 4978 Query 18953 TCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT 19012 ||||| ||| | || ||||| | ||||||| ||||| | || || |||||||| Sbjct 4977 TCCAACCGATTTAGCCGAAATGGCATTACCTCCCTGTCATCTCATGTGCCAATTTTACGT 4918 Query 19013 TGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGT 19072 |||||| || |||||||| |||||| | |||||| |||| | ||||| || || || || Sbjct 4917 TGCAAATGGGGAATTATCATGCCAAATGTACCAGCGATCCGCTGATATTGGTCTGGGCGT 4858 Query 19073 ACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACT 19132 || || || |||||| | || || ||| | || | || | || || || || | || Sbjct 4857 TCCATTTAATATTGCTAGCTACGCGCTTTTGACAAAAATGATTGCACACGTGACTGATCT 4798 Query 19133 TAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCA 19186 || |||| || || ||||| || || ||||| ||||| ||| ||||||| Sbjct 4797 CCAACCCGGCGAGTTTGTTCATGTGATCGGAGATGCCCATATCTACATGAATCA 4744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399445918235805