Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq3366 266 3e-66 >seq3366 Length=157547 Score = 266 bits (294), Expect = 3e-66 Identities = 525/762 (69%), Gaps = 31/762 (4%) Strand=Plus/Plus Query 13918 ATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCAT 13977 |||||| | ||| | ||| ||||| ||||| ||||| |||| ||| || || | ||||| Sbjct 38969 ATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCAT 39028 Query 13978 AAAATCAAATGGATTTGT----TGACATAAACACTTTATCACAACCTAGTTCTAATAGTA 14033 | ||||| ||||| | ||| |||| ||| | || || ||| | || | Sbjct 39029 CCAGTCAAAGGGATTAGAAGCGTGATATAA---CTTGCTGACG-CCAAGTGCATGTAACA 39084 Query 14034 ATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTT 14093 ||| |||||| | ||||| || |||||| ||| ||| ||||||| || ||||| | Sbjct 39085 ATCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCT 39144 Query 14094 TTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAA 14153 || |||| | || || |||||||| ||| || || || ||| ||| | Sbjct 39145 CGACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGA---AATGA 39201 Query 14154 TCGTAATAATTT--CATTAGAAGGAGGATATTTTAGATGTTTAAAA---ATTAAACACGC 14208 | | | ||| | || ||| | | |||| |||| | || | ||| || Sbjct 39202 TTGCATGAATAGAGCCTTCT--GGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGC 39259 Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268 ||| |||||||| || || ||||| | ||| || || || |||||||| | ||| || Sbjct 39260 AAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGG 39319 Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGC-GAATGATCCGGAAAAGAATATTC 14327 ||||||||||||||| || | ||||||||| | ||| |||||||||||| || || |||| Sbjct 39320 CATCAATCCTCGTTTCTTCAGCCAAAATATAG-AGCAGAATGATCCGGAGAAAAAGATTC 39378 Query 14328 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT--TTTTGTTCGATAT 14385 | || || || ||||| |||| | || |||| ||||||| || | ||| | ||| Sbjct 39379 CTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCG--CA 39436 Query 14386 CCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAA 14445 |||||| ||||||| | ||| || ||| | ||||||||||| || | Sbjct 39437 CCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCATAG 39496 Query 14446 TAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14505 |||||| | || || | | | | |||||||||||||| | ||| ||||| ||| Sbjct 39497 TAAATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTC 39556 Query 14506 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14565 |||||||| ||||| || || || || || |||||||| |||| |||||| | ||| Sbjct 39557 CGAGTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGATTTG 39616 Query 14566 TACCT--CTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCA 14623 |||| ||| ||| || | ||| | |||||||||||| || |||||||| |||||| Sbjct 39617 AACCTCACTGCTGAAATTCAT--GGCGAGATTTTCATTAACAATCCCATCACTGGCTGCA 39674 Query 14624 AAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG 14665 || || ||||| | || ||| ||||||| | ||| |||||| Sbjct 39675 AAGAAGGCCAACACGTGTTTGATAAAGTGT--CTC-TCATTG 39713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482273676241720