Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3366 109 4e-19 >seq3366 Length=157547 Score = 109 bits (120), Expect = 4e-19 Identities = 285/419 (68%), Gaps = 18/419 (4%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGCCATATTCTGGCT 22808 ||||||||||| || ||||| || | || || || ||||| ||| | ||||| ||||| Sbjct 39397 GCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCT-CTATATTTTGGCT 39339 Query 22809 GAAGAAACGTTCGCTCATGCCAGGG-TTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||||| | ||||| || || || ||||| || ||| | || || ||||| | Sbjct 39338 GAAGAAACGAGGATTGATGCCTGGACTTTGC-TTTTCAAATGAGCTCATCAGTCGTGATG 39280 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC 22927 |||| ||||| ||||||||||| ||| || ||| | || ||| ||| || | | | Sbjct 39279 AAGGACTACATTGTGACTTTGCATGTCTGATGTACTCGAAACTGGTAAATAAGC--TTCC 39222 Query 22928 AGGACGATGCA--CATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCA 22985 || | | | | ||| |||||| || || |||||| ||| || | || | | Sbjct 39221 AGAAGGCTCTATTCATGCAATCATTTCCGACGCCGTTATCATCGAACAAGAATTTGTACG 39162 Query 22986 AGAGGCAC-TAAAGACACCCCTACTTGGTATGAATAGTGACAGT---ATGAGACTGTACA 23041 ||| ||| | || | ||| |||| |||||| | | ||| ||| | | |||| Sbjct 39161 AGATTCACTTCCAGTC-GAGCTAATTGGAATGAAT--TCA-AGTTTGATGGGTCAATACA 39106 Query 23042 TACAGTTTGTTGCAGATCGCCTGCTCGATGC-CCTGGGTTATGCAAAGATGTATAACGTT 23100 | ||||||| || ||||| || | |||| | ||| | || ||| | ||| ||| | Sbjct 39105 TCGAGTTTGTGGCGGATCGATTGTTACATGCACTTGGCGTCAGC-AAGTTATATCACGCT 39047 Query 23101 GCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159 | ||||| ||||| | ||||||| ||| | |||| ||||||||||| ||||| Sbjct 39046 TCTAATCCCTTTGACTGGATGGATATGATTTCTCTGCAAGGAAAAACAAACTTTTTTGA 38988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356181809089387