Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq459 149 1e-31 seq921 129 9e-26 >seq459 Length=68318 Score = 149 bits (164), Expect = 1e-31 Identities = 199/276 (72%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||| | | |||||| || |||||||||||||||||||| ||||| || Sbjct 21022 GCAAAGCGTCATCGTAAAGTTCTTCGTGACAACATCCAAGGAATCACCAAACCAGCCATT 20963 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| ||||||||||| || || || ||| || || | |||| ||||| | Sbjct 20962 CGTCGTCTTGCTCGTCGTGGAGGTGTTAAACGTATCAGCGGTCTTATCTACGAAGAAACA 20903 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | |||| | || | ||| | | | ||||| | ||| | | || || ||| Sbjct 20902 CGAGGTGTTCTCAAAGTGTTCTTGGAAAATGTTATTCGCGATTCCGTAACTTACACAGAG 20843 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| | |||||||| || | |||||| | ||||| ||| | ||||||||||| Sbjct 20842 CACGCTCGTAGAAAGACTGTAACAGCAATGGATGTGGTCTACGCACTTAAACGTCAAGGA 20783 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTA---ATCTTCT 16705 |||| | |||||||| || |||| ||||||| Sbjct 20782 CGTACACTATATGGTTTCGGTGGTTAGATATCTTCT 20747 >seq921 Length=22787 Score = 129 bits (142), Expect = 9e-26 Identities = 185/261 (71%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || |||||||| | | || || |||||||||||||| ||||| ||||| ||||| Sbjct 10054 CGCCAAACGTCATCGTAAAGTACTGCGCGATAACATCCAAGGTATCACAAAGCCCGCTAT 9995 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| ||||||||||| || || ||||| || || || |||| ||||| | Sbjct 9994 CCGTCGTCTTGCTCGTCGTGGAGGTGTAAAGCGAATCAGCGGTCTGATCTACGAAGAAAC 9935 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | || | || || | | || |||| ||| | | || ||||| Sbjct 9934 ACGTGGAGTTCTCAAAGTATTTCTTGAAAATGTCATCCGTGACTCAGTAACATACACCGA 9875 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || | || || || || | |||||| |||| ||||| ||||||||||||| Sbjct 9874 GCATGCGCGCAGAAAAACAGTGACAGCAATGGATGTCGTATATGCTCTGAAACGTCAAGG 9815 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 | | | | || |||||||| Sbjct 9814 CAGAACCCTCTACGGTTTTGG 9794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79064293231797