Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq113 279 1e-69 seq2177 156 1e-32 seq3366 125 2e-23 >seq113 Length=12257 Score = 279 bits (308), Expect = 1e-69 Identities = 812/1224 (66%), Gaps = 35/1224 (3%) Strand=Plus/Plus Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446 |||||| || | ||| || |||||||||| || || | ||| | ||||| | | ||| Sbjct 4061 TATTTT-GGCTTTAAAACTCTGGAGAAATCGTATCTGTTGCGTGTGAATGGAAA-AGTGT 4118 Query 363447 -TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTG 363505 ||||||||| || |||||| ||||||| || ||| | || || || | || | | Sbjct 4119 GTGAACGCCCACAACATATGATAATGCGAGTGGCTGTCGGCATACACAAAGAGAATTTGG 4178 Query 363506 ATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTC----GTGTATTCACGCACGCCACG 363561 |||||| | ||||| ||| | | | || | | || | || ||||| || || Sbjct 4179 ATGCCGTTTTGGAAACGTATGAACACAT--GT-CACAAAAGT-TCTTTACGCATGCAACT 4234 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 || || | | |||||| ||||| | | || || | || || || ||||| || Sbjct 4235 CCGACGCTTTTCAATGCGGGAACGCCTCGACCCCAATTATCGTCGTGTTTTCTATTATCC 4294 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||| | || ||||| ||||| || || | ||||| || || | ||||| |||||| Sbjct 4295 ATGCAAGATGATTCTATCGACGGCATTTACGACACGCTGAAACAATGTGCGTGTATTTCA 4354 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACAT 363740 ||| || ||||| ||||| || || |||| |||| | ||| |||||||| || Sbjct 4355 AAGTGGGCTGGCGGTATTGGCGTCAGTATTTCCAATATTCGCTCCACC-AACAGTTATAT 4413 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 |||||| || ||| |||||||| | ||||| |||||||| ||||| | | || Sbjct 4414 TCGCGGGACGAATGGAAGTTCGAATGGAATTGTTCCAATGCTTCGGGTGTTCAATGACAC 4473 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 || | ||||| || || ||||| || ||||| |||||| | ||||| || ||||| || Sbjct 4474 AGCTCGATACGTTGATCAAGGTGGTGGGAAGCGGAAAGGGTCTTTTGCAATTTATCTAGA 4533 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920 ||| ||||| ||||| ||||||||||| || || || || || ||||| || Sbjct 4534 GCCCTGGCATGCGGATATCTTTGAGTTTCTGGAACTACGTAAGAATCATGGAAATGAACT 4593 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 || ||||| ||| | || ||||| |||||| | | || | |||||||| || || Sbjct 4594 CCATCGAGCACGAGATTTATTTTATGCTCTTTGGATCCCCGATCTGTTTATGAAACGTGT 4653 Query 363981 GG-AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039 || || || ||||| ||| | || || || |||| |||| | |||| || Sbjct 4654 GGAAGACAACCAAGAA-TGGAGTTTATTCTGTCCGAACGAGGCTCCACGACTTTATGAGA 4712 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099 |||||| ||| | || ||| |||| |||||||| || || | | || || | Sbjct 4713 CATGGGGAAGCGAATTTGATGCGTTATATGAAAAGTACGAGTCTCAAAACATTGCCCGAA 4772 Query 364100 AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAA 364159 |||| | || ||| | | ||||||||||| ||||| ||||||||||| |||| Sbjct 4773 AGACTGTCAAAGCCCAGCAATTGTGGTTTGCCATTTTGGATAGTCAGATTGAGACCGGAA 4832 Query 364160 CACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTA 364219 | || |||||| | |||||||| | || || || || ||||| |||||| | ||||| | Sbjct 4833 CGCCGTATATGCTTTACAAAGACGCTTGTAATCGTAAATCCAATCAGCAGAATCTTGGAA 4892 Query 364220 CAATTC-AGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACT 364278 | |||| | || ||||| || || || || || || ||| | | || | || Sbjct 4893 CCATTCGATCA-AGCAATCTCTGCTGTGAAATCATCGAGTACTCAGACTCCAAAGAAGTG 4951 Query 364279 GCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTT--TGTAAAAGATGGTACTTTTG 364336 || ||||| || | || || ||||| | | || |||| ||| | | || Sbjct 4952 GCAGTATGCAATTTGGCTTCCATCGCATTGTCAAAATTTGTGTATCAGAAAGAATTT--- 5008 Query 364337 ACCACCAGCATCTTTATGACGTAA--CCTATCAT-GCTACTTGCAATCTCGACAAGGTTA 364393 | ||| |||| ||| || | | || | ||| |||||| |||| | | Sbjct 5009 -CAGTTTGCAAAATTAT-ACGAAATCACAAAAATCGTTACGAAAAATCTCAACAAAATCA 5066 Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCG 364452 | || ||||||||||| ||||||||||| | || | | ||| ||| ||||| ||| Sbjct 5067 TTGATCTCAATTATTATCCGATTCCTGAAGCACAAGTGAGC-AATCAGCGACATCGACCG 5125 Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTG--ACGTTTTTA-TGATGCTCAAGATGGCATTT 364509 ||||| | || || || || || || | ||||||||| ||||| | | ||||| Sbjct 5126 ATTGGAATCGGCGTTCAAGGTCTTGCCGATACGTTTTTACTGATG---AGTCTTCCATTT 5182 Query 364510 GATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCA 364569 || | ||||| | || || || || || |||||||| |||||||| || || Sbjct 5183 GAAAGCAAAGCTGCTCGCGAGCTCAACAAAGAAATTTTTGAAACGATGTATTTCGCGGCG 5242 Query 364570 ATGACTGCTTCGTGTGATTTGGCA 364593 ||| ||||| || |||||| Sbjct 5243 ATGGAAGCTTCCATGGAATTGGCA 5266 >seq2177 Length=6073 Score = 156 bits (172), Expect = 1e-32 Identities = 282/406 (69%), Gaps = 6/406 (1%) Strand=Plus/Minus Query 111485 AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAA 111544 |||||| ||| | |||||| | ||||| ||||||||||| || || |||||| |||| Sbjct 5145 AGAAGGCGATTTAGGACCAATCTACGGCTTTCAATGGCGTCATTTCGGTGCAAGTTACAC 5086 Query 111545 AACCATGCA--CGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGAT 111602 | ||||| || | | | | | ||||| ||||||| | |||| || | Sbjct 5085 AGATATGCATGCGGATTACA-GCGGC-CAGGGCTTTGATCAACTCGCCGATGTGATACA- 5029 Query 111603 CAAATTAAGAACA-ACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGC 111661 |||| | | ||| ||| || || ||| || || || | | ||||| |||| | Sbjct 5028 CAAACTCAAAACTGACCAAAATTGTCGACGTATCATCTTATCCGGTTGGAATCCAACCGA 4969 Query 111662 ATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGG 111721 || | |||||||| | || || |||||||| |||||||| ||||| || | || Sbjct 4968 TTTAGCCGAAATGGCATTACCTCCCTGTCATCTCATGTGCCAATTTTACGTTGCAAATGG 4909 Query 111722 GATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAA 111781 | | |||||||||||||| |||||||| |||||||||||||| || ||||| ||||| Sbjct 4908 GGAATTATCATGCCAAATGTACCAGCGATCCGCTGATATTGGTCTGGGCGTTCCATTTAA 4849 Query 111782 TATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGG 111841 |||||| || ||||| || | || | || || || | || ||||| |||| || Sbjct 4848 TATTGCTAGCTACGCGCTTTTGACAAAAATGATTGCACACGTGACTGATCTCCAACCCGG 4789 Query 111842 TGAATTCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCAC 111887 || || |||| || ||||||||||| ||| | |||| || ||| Sbjct 4788 CGAGTTTGTTCATGTGATCGGAGATGCCCATATCTACATGAATCAC 4743 >seq3366 Length=157547 Score = 125 bits (138), Expect = 2e-23 Identities = 491/760 (65%), Gaps = 18/760 (2%) Strand=Plus/Minus Query 22197 ACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAA 22256 ||| ||||||||| | | | || |||||||| || || || || ||| ||| || Sbjct 39704 ACACTTTATCAAACACGTGTTGGCCTTCTTTGCAGCCAGTGATGGGATTGTTAATGAAAA 39645 Query 22257 TCTAGTGACTAATTTT-GCATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTG 22315 ||| | | ||||| ||| ||| ||||| ||| || || |||| || ||||| Sbjct 39644 TCTCGCCATGAATTTCAGCAG-TGAGGTTCAAATCCCGGAAGCTCGATGCTTTTATGGAT 39586 Query 22316 TGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTC--TAT-GAT-GCTACAGTCA 22371 | ||||| || |||||| | ||| ||||| ||||| ||| ||| | |||| || Sbjct 39585 TCCAAATTGCAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGATTGATACATACA 39526 Query 22372 CTCGTAGAAGATAAAGACGAACAACGAAACTTATTCCGCGCGATTCGCACCATTCAATCA 22431 | ||||| | |||| ||| | ||| | |||||||| || || | | Sbjct 39525 ----TCAAAGATCCAACCGAAAAACAGCATTTACTATGCGCGATTGAAACAATCCCGTGC 39470 Query 22432 ATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAA--CAATGAACGT-TCATTCGCG 22488 ||| ||||| ||| | |||||| |||||||| | ||| | | | || || || Sbjct 39469 GTTACCAATAAAGCACAATGGGCGTTGAAATGGTGCGATCCAAAGTATGCCTCGTTTGCA 39410 Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 ||| | | | || ||||| | || ||||| || || || || ||| |||| || | Sbjct 39409 GAAAGAGTGGTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCT 39350 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || |||||||| || ||||| | | | ||||| || || |||||||||||| | || Sbjct 39349 ATATTTTGGCTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATC 39290 Query 22609 AGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATT 22668 || || ||||| || || ||| || ||||| ||| || | || ||| | | | Sbjct 39289 AGTCGTGATGAAGGACTACATTGTGACTTTGCATGTCTGATGTACTCGAAAC---TGGTA 39233 Query 22669 CATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGT 22728 |||| |||||| | | || | | || || ||| | | || ||| | |||| Sbjct 39232 AATAAGCTTCCAGAAGGCTCTATTCATGCAATCATTTCCGACGCCGTTATCATCGAACAA 39173 Query 22729 CTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGT 22788 |||| | | || | | ||||| || ||||| || ||| | | ||| || Sbjct 39172 GAATTTGTACGAGATTCACTTCCAGTCGAGCTAATTGGAATGAATTCAAGTTTGATGGGT 39113 Query 22789 ACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGG-TTATGCAAAGCATTA 22847 ||| || | ||||| || ||||| | ||| | |||| || | || ||| || Sbjct 39112 CAATACATCGAGTTTGTGGCGGATCGATTGTTACATGCACTTGGCGTCAGC-AAGTTATA 39054 Query 22848 TAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTT 22907 | ||| |||||| ||||| |||||||| | ||||| || ||||||| || || || Sbjct 39053 TCACGCTTCTAATCCCTTTGACTGGATGGATATGATTTCTCTGCAAGGAAAAACAAACTT 38994 Query 22908 CTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTT 22947 || || ||| | ||||| ||||| ||| | |||||| Sbjct 38993 TTTTGAGAAACGCGTTGGAGAATATGCGAAATCTGGTGTT 38954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303154395028478