Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3366 226 4e-54 seq113 215 7e-51 >seq3366 Length=157547 Score = 226 bits (250), Expect = 4e-54 Identities = 422/610 (69%), Gaps = 11/610 (2%) Strand=Plus/Plus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 |||||| |||||| || || || ||||| || || || | ||| || | || || |||| Sbjct 39247 ACATCAGACATGCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAA 39306 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 | ||||| ||||| | || || || || ||||||||||| || ||| |||||||| Sbjct 39307 AGCAAAGTCCAGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCG 39365 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 || || || |||||||| || ||||||||||| | | ||| ||| || | ||| Sbjct 39366 GAGAAAAAGATTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATAC 39425 Query 32832 TCATGTATC-CACT-TTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 32887 | || ||| ||| ||| | ||||| | || || || | || || || ||||| || Sbjct 39426 TT-TGGATCGCACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTC 39484 Query 32888 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 32947 || || | | || | |||||| | |||||| | |||||||||||||| | Sbjct 39485 AATCGCGCATAGTAAATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAA 39544 Query 32948 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGC 33007 ||||| |||||| || || ||||| || || ||||| ||||| || ||||||| ||| Sbjct 39545 CGAATACACTTCCGAGTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGC 39604 Query 33008 CTCGGTAATCTGTACTT--CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCG 33065 || | || || || | ||| ||| || | || | ||||||||| || || || Sbjct 39605 TTCCGGGATTTGAACCTCACTGCTGAAATTCAT--GGCGAGATTTTCATTAACAATCCCA 39662 Query 33066 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT 33125 |||||||||||||| || ||||| || ||||| ||||| | | | || | | || Sbjct 39663 TCACTGGCTGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATA 39722 Query 33126 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 33185 ||| ||| ||||| || || | | ||| | |||||| | |||||||| |||| Sbjct 39723 TTAAGCCAGTCATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCC 39782 Query 33186 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 33245 ||||| || |||||||| | ||| || ||| | ||| || ||||| | ||||| | Sbjct 39783 TCTGCTTTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGG 39842 Query 33246 TTTGGATTTT 33255 || ||||||| Sbjct 39843 TTCGGATTTT 39852 >seq113 Length=12257 Score = 215 bits (238), Expect = 7e-51 Identities = 1028/1623 (63%), Gaps = 22/1623 (1%) Strand=Plus/Minus Query 62487 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATG 62546 || |||| || ||||| || || | || || || || | || | ||| ||||||| Sbjct 5237 CGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAGCAGCTTTGCTTTCAAATG 5178 Query 62547 GATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTAT 62606 || | | | || | ||||| || || | |||||||| || || || || |||| || Sbjct 5177 GAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGCCGATTCCAATCGGTCGAT 5118 Query 62607 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 62666 ||| || ||| | || ||||| ||||| ||||||||||| | ||| || ||||| | Sbjct 5117 GTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAATAATTGAGATCAATGATTTTGT 5058 Query 62667 TGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCAT 62726 |||||||| | || | ||| | || | | ||| ||| | |||| | | Sbjct 5057 TGAGATTTTTCGTAACGATTTTTGTGATTTCGTATAATTTTGCAAACTGAAATT--CTTT 5000 Query 62727 CTATTACAAACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 62784 || |||| | || || |||||| | || |||| ||| || || || || || || | Sbjct 4999 CTGATACACAAATTTTGACAATGCGATGGAAGCCAAATTGCATACTGCCACTTCTTTGGA 4940 Query 62785 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 62844 || | || | || || ||| ||| ||||| || | |||||||| | ||| || Sbjct 4939 GTCTGAGTACTCGATGATTTCACAGCAGAGATTGCTTGATCGAATGGTTCCAAGATTCTG 4880 Query 62845 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 62904 ||||| || ||||| || || || ||||| || | || || || || ||||| Sbjct 4879 CTGATTGGATTTACGATTACAAGCGTCTTTGTAAAGCATATACGGCGTTCCGGTCTCAAT 4820 Query 62905 CTGAGATTCTATAATCGCTTTCCAGACGACT-CGAGCCTTTATTATAGATTT---GTATC 62960 |||| || | ||| || ||| | | | | | |||| | || || | Sbjct 4819 CTGACTATCCAAAATGGCAAACCACA--ATTGCTGGGCTTTG--ACAGTCTTTCGGGCAA 4764 Query 62961 TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63020 | |||| ||||| | ||| || || || ||| |||||| | | | Sbjct 4763 TGTTTTGAGACTCGTACTTTTCATATAACGCATCAAATTCGCTTCCCCATGTCTCATAAA 4704 Query 63021 GTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63080 ||| ||| || | |||||| | || ||| ||| || || | ||| ||||||| Sbjct 4703 GTCGTGGAGCCTCGTTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCA 4644 Query 63081 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 63140 |||| ||||| || ||||||||||| ||||| ||||| | || ||| || |||| Sbjct 4643 TAAACAGATCGGGGATCCAAAGAGCATAAAATAAATCTCGTGCTCGATGGAGTTCATTTC 4584 Query 63141 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63200 | |||||| || || || ||| | | ||||| | |||||| || || | || | Sbjct 4583 CATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAA 4524 Query 63201 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63260 | || | | || ||| || || || ||||| | ||||| ||| |||| ||| Sbjct 4523 TTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGA 4464 Query 63261 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTC 63320 | || | | |||||||| ||| ||||| || | ||||| ||||| ||||| || Sbjct 4463 ACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGT 4404 Query 63321 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63380 ||| |||||||| ||| | || || || || ||| || || || | | Sbjct 4403 TGGTGGAGCGAATATTGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACG 4344 Query 63381 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 63440 | ||| |||| | ||| || || ||||| || ||| |||||| |||| | ||||| Sbjct 4343 CACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAA 4284 Query 63441 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAG 63500 |||| || | |||| | ||| ||||||||||| || | || |||| || || | Sbjct 4283 AACACGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCG 4224 Query 63501 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 63560 |||| | |||| || | | | ||||| || | | | | || | || | || | Sbjct 4223 TAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGGCATCCAAATTCTCTTTGT 4164 Query 63561 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 63620 | || || || || || ||||||| ||| || || || | |||| | || || | Sbjct 4163 GTATGCCGACAGCCACTCGCATTATCATATGTTGTGGGCGTTCACACACTTTTCCATTCA 4104 Query 63621 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63680 ||||| || ||||| |||| ||||||||| |||||||||| ||| |||||||| Sbjct 4103 CACGCAACAGATACGATTTCTCCAGAGTTTTAAAGCCAAAATAGTCGTAATCAAAGTCTC 4044 Query 63681 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAA 63740 || ||||| | || ||||| || || | | |||| | || ||| | Sbjct 4043 TATCACCGATAATGGCGGAATTGAGAGCTTCTTTGTTCTCCATAAC-AATTCGATGCACA 3985 Query 63741 TACTTG--AAATAATAGGAAAATG---TTTCCCATTTTTAGGATTGACATAGTTGAATAA 63795 | ||| | |||| ||| | ||| ||| | || | || ||||| Sbjct 3984 TCGTTGGCGATTAAT-GGAGCGGGTACTTTGGTGGTTTCGTGCTTATTTTCGTAAAATAA 3926 Query 63796 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTAT 63855 | || |||||| || | ||| ||||| | ||| |||| ||| || | || || Sbjct 3925 ---TTGAATGTTTTCACTGAAGACTTTGTTTGTATTTTTATGTAAATTGGAAATAGCAAT 3869 Query 63856 TCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGC 63915 || ||| || | ||| |||| ||||||||||| | || ||||| |||| || Sbjct 3868 TCGAGCAGCCAATTTGGAGAAATCGGGATGTTGTGTGCTGCAGTAAGCTGCGGTTTCTGC 3809 Query 63916 TGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 ||||| ||||||||| || || || || ||| | || || || ||| Sbjct 3808 TGCCAATTCGTCCAATTCCGATGTGGTGACGCCCGGATACACGCCAGCAATCACTTTCTG 3749 Query 63976 AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACG 64035 || ||||| | ||||| | | || ||||||||| || || | |||| | || || Sbjct 3748 AGATATTTGGACGGGATCAACGTATTCTGTGTTTAAGTTGTAGCAGAGTTTTGTGATTCG 3689 Query 64036 AGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGACAAACAT 64095 | |||||||| || || |||| ||| || ||| | ||||| |||||| |||| Sbjct 3688 CGCAGTGATTTTGTCGAATTTGACGACTTCTTTTCGTCCGTCACGTTTGATGACATACAT 3629 Query 64096 TTT 64098 ||| Sbjct 3628 TTT 3626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633537517548400