Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq693 86.0 1e-11 seq10289 84.2 4e-11 >seq693 Length=24918 Score = 86.0 bits (94), Expect = 1e-11 Identities = 144/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 279350 GGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTAC 279409 |||||| ||| | ||||| ||||| | || |||||||| | |||||| || ||| | Sbjct 7524 GGATCTATGTAATTGTGAGTTCTCTTTGGCGTATGGTGGTATGATTCTACTGAACAACGC 7583 Query 279410 CCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAA 279469 ||| | | ||| | || | || ||||||||| ||||| |||||| ||||| Sbjct 7584 CCGGTTGCGTTTGAAGAGAGGACATCGTTATGGTCTCTGTGGTCCAAATGGATGCGGTAA 7643 Query 279470 GAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTC---CTAACGCATC 279526 || || ||| | ||||| || ||||| || ||||||||||||| |||| | Sbjct 7644 ATCAACGCTGATGAGAGCCATCGCTAACGGCCAACTGGAAGGATTTCCGTCTAA---AGA 7700 Query 279527 TGAGGTAAGGACAGTGTATGTAGAGCA 279553 |||| ||| ||| |||| ||| || || Sbjct 7701 TGAGCTAAAGACTGTGTTTGTCGAACA 7727 >seq10289 Length=244 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCACAT 142570 ||||||||| |||||||||| |||||||| |||| ||||||||||||||||| ||||| Sbjct 8 TAGCTCAGTTGGTAGAGCGCAAGACTCTTGATCTTGTGGTCGTGGGTTCGAGGCCCACGG 67 Query 142571 CGGGCA 142576 ||||| Sbjct 68 TGGGCA 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027679705102289