Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq113 120 4e-22 seq3366 111 2e-19 >seq113 Length=12257 Score = 120 bits (132), Expect = 4e-22 Identities = 321/483 (66%), Gaps = 11/483 (2%) Strand=Plus/Minus Query 114788 TCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAG 114847 || || ||||| ||||| || || || |||||||| ||||| | || | ||| || Sbjct 4659 TCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAAATCTCGTGCT 4600 Query 114848 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 114907 ||| ||||| || ||||| ||| | |||| ||| || | ||||||||| ||| Sbjct 4599 CGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCATGC 4540 Query 114908 CACGGTTCCAGGTACACCGCGATTGACCCCTTACGA---CGACCAGCCTGGTTTACATAC 114964 || || || || || | || | ||||| || || | |||| | || | || || Sbjct 4539 CAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGTAT 4480 Query 114965 CTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTC 115024 | |||||| |||| || || ||||||||||||| || |||| || ||||| ||| Sbjct 4479 CGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTC 4420 Query 115025 CCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGC--ATACCAATACCCCCTG 115082 || |||||| | || ||| | || || |||| | | | |||||||| || | Sbjct 4419 CCGCGAATATAACTGTTGGTGGAGC-GA-ATATTGGAAATACTGACGCCAATACCGCCAG 4362 Query 115083 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCAC 115142 |||||||||| || ||| || | | || || |||| || |||||||| || ||| Sbjct 4361 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCA- 4303 Query 115143 CCTTATTTGCGATA--AGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAA 115200 ||| || |||| || || || ||| | ||| || | || || || || ||||| Sbjct 4302 TCTTGCATG-GATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAA 4244 Query 115201 GAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGAC 115260 || || || || || || | || | ||| ||||| | || || || ||||| || Sbjct 4243 AAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAAC 4184 Query 115261 GGC 115263 ||| Sbjct 4183 GGC 4181 >seq3366 Length=157547 Score = 111 bits (122), Expect = 2e-19 Identities = 188/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || || || || ||||| |||||| ||||| || ||||| ||||| ||||| | || Sbjct 39270 TGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCT 39329 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 || ||||||| ||| || || | || ||||| || ||||| |||||||| || || | Sbjct 39330 CGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCC 39389 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCC 126238 || || || | | | || ||||| ||| |||||| || |||| |||| |||| Sbjct 39390 GCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCACCATTTCAACGCC 39449 Query 126239 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG-AGTTCCTTCTT 126297 || || || || || | ||||||| || | ||||| || || | | || || Sbjct 39450 CATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG-CATAGTAAATGCTGTTT 39508 Query 126298 TTCTGATGGATCTTTGATGTACTTATCTAT 126327 ||| | ||||||||||||||| |||| || Sbjct 39509 TTCGGTTGGATCTTTGATGTATGTATCAAT 39538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597264527111320