Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6751 105 7e-18 >seq6751 Length=68926 Score = 105 bits (116), Expect = 7e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || ||||||||||| || | || || ||| || ||||||||||||| | Sbjct 5741 GACTCTTTCTGAATGTTGTAATCCGCAAGCGTGCGTCCGTCTTCCAGTTGTTTACCGGCA 5682 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | |||||||| || ||||| ||||| || ||||||||||| ||| || || | | Sbjct 5681 AAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGGATCTTCGCCTTCACA 5622 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | || || | || ||||| || | ||| | ||||| |||||||| || || Sbjct 5621 TTG-TCGATAGTATCTGAAGATTCCACTTCCAACGTAATAGTTTTCCCAGTCAGCGTCTT 5563 Query 138600 TACAAAAATCTGCAT 138614 |||||||| ||||| Sbjct 5562 AACAAAAATTTGCAT 5548 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||||| || | |||| || || || |||||||| || Sbjct 5090 CCACCACGAAGACGTAGCACTAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCA 5031 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||| || |||||||| || | |||| ||||| || || || ||||| Sbjct 5030 AGAGTACGTCCGTCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGA 4971 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | || | |||| | || | ||||| | ||||| || Sbjct 4970 ATTCCTTCTTTGTC-TTGAATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAAC 4912 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 || | || | || || ||||| || ||||| |||||||||||||||| Sbjct 4911 TTCCAAAGTGATGGTCTTTCCAGTAAGCGTTTTCACAAAAATCTGCATGG 4862 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| || || || |||||||| || | || || ||| || ||||||||||||| Sbjct 5515 TTGATTCTTTCTGGATGTTGTAATCCGCAAGCGTTCGTCCGTCTTCTAGTTGTTTACCGG 5456 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| ||||| || || || ||||| || ||||| ||||| ||| || || | Sbjct 5455 CGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCTTCGCCTTCA 5396 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | ||||| | ||||| || || | || | ||||| ||||||| |||| Sbjct 5395 CGTTGTCAATAGTGTCTGATGACTCTACTTCCAAAGTTATAGTTTTTCCAGTCAAGGTTT 5336 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 5335 TCACAAATATCTGCAT 5320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496188401072880