Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq113 123 3e-23 seq3366 91.5 2e-13 >seq113 Length=12257 Score = 123 bits (136), Expect = 3e-23 Identities = 241/352 (68%), Gaps = 13/352 (4%) Strand=Plus/Minus Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751 ||||| |||| ||| || | |||||||| ||||| || || ||||| | || | || Sbjct 4572 CGTAGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGAC 4513 Query 110752 CCCTTACGA---CGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808 || || || | ||| | || | ||| || || |||||| ||||||| |||| ||| Sbjct 4512 CCTTTCCGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGC 4453 Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATT---CTGGACTTATTGGCA 110865 || |||| |||||||| || ||||| || || | ||| ||| || ||| Sbjct 4452 ATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTG---TTGGTGGAG 4396 Query 110866 CGAATGTCGTGGATATGCATAC--CAATACCACCCGCCCACTTACTAATTTGTGCACACT 110923 ||||| | |||| || | || ||||||| || |||||||| ||| ||||| | Sbjct 4395 CGAATAT--TGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATT 4338 Query 110924 CTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983 | | || || | ||||| || || || ||||| | | ||| | |||||| || | Sbjct 4337 GTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAAAACACG 4278 Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035 | || | || || |||||||||||||||||||| || || || || ||||| Sbjct 4277 ACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATG 4226 >seq3366 Length=157547 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| || ||| || |||||||| ||| |||||||||||| |||||||||||| Sbjct 39258 GCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCA 39317 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 ||||| | ||||| |||||| |||||||| || | || || ||| || || ||||| Sbjct 39318 GGCATCAATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATT 39377 Query 119616 CCCTCCAC 119623 || || || Sbjct 39378 CCTTCGAC 39385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588888176316200