Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq113 165 1e-35 >seq113 Length=12257 Score = 165 bits (182), Expect = 1e-35 Identities = 682/1057 (65%), Gaps = 44/1057 (4%) Strand=Plus/Minus Query 106279 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAG--ACTTTCGC 106336 ||| || ||||||||||| || | ||||| |||| |||||| ||| |||| || Sbjct 5155 ATCGGCAAGACCTTGAACGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGC 5096 Query 106337 G-CAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 106395 ||| || |||||| |||| ||||||| | ||| |||||||| ||||| || Sbjct 5095 TTCAGG---AATCGGATAATAATTGAGATCAATGATTTTGTTGAGATTTTTCGTAACGAT 5039 Query 106396 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT 106455 ||||||||||| | | |||| || | | ||| | | | ||| || ||| | || Sbjct 5038 TTTTGTGATTTCGTATAATTTTGCAAACTGAAA--TTC---TTTCTG-ATACACAAATTT 4985 Query 106456 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 106515 || | ||||| || ||||||||||| || ||| || | |||| |||||| | Sbjct 4984 TGACAATGCGATGGAAGCCAAATTGCATACTGCCACTTCTTTGGAGTCTGAGTACTCGAT 4925 Query 106516 AATTTCTGTACACAAGTTG---GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTT 106572 ||||| || | ||| || | ||| || || | ||||| || || || Sbjct 4924 GATTTCACAGCAGAGATTGCTTGATCG---AATGGTTCCAAGATTCTGCTGATTGGATTT 4868 Query 106573 TTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAG 106632 || || || || ||||| ||||| || ||||| || ||||| |||| | | Sbjct 4867 ACGATTACAAGCGTCTTTGTAAAGCATATACGGCGTTCCGGTCTCAATCTGACTATCCAA 4808 Query 106633 AATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTT--GGCCCGTCCCTCCGCCTCG 106690 ||| || ||||| | |||| ||| | | || ||| | | |||| Sbjct 4807 AATGGCAAACCACAATTGCTGGGCTTTGACAGT--CTTTCGGGCAATGTTTTGAGACTCG 4750 Query 106691 TACTTTGTGTAGAGGGCTTCAAACTC-CTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 106749 |||||| || | || ||||| || || |||| | || | || | ||| |||| Sbjct 4749 TACTTTTCATATAACGCATCAAATTCGCTTCCCCATGTC-TCATAAAGTCGTGGAGCCTC 4691 Query 106750 GTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGG 106809 || |||||||| | | ||||| || || || || ||||| || || || || Sbjct 4690 GTTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGG 4631 Query 106810 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 106869 ||||| || | |||| | ||||| ||| ||| | || || || || Sbjct 4630 GATCCAAAGAGCATAAAATAAATCTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACG 4571 Query 106870 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC 106929 || || || ||||| | ||||||||| ||||| ||||| ||||| | ||| | ||| || Sbjct 4570 TAGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGA-CC 4512 Query 106930 CTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 106983 ||||| ||| ||| |||||| || || || |||||| | || || || ||||| Sbjct 4511 CTTTC--CGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGAAG 4454 Query 106984 CATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCT 107043 |||||||| ||| |||| || ||||| ||||| |||||| | || ||| | Sbjct 4453 CATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGTTGGTGGAGCG 4394 Query 107044 CACATCATGGATGTGC--ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 107101 | || |||| | | | |||||||| |||||||||||||| || |||||| | Sbjct 4393 AATAT--TGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATTGT 4336 Query 107102 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 107161 | || || | || || |||| ||| || || || | ||| | || || || Sbjct 4335 TTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAAAACACGAC 4276 Query 107162 GACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG---AATGAAC 107218 || | || |||| || || || |||||||| || || || ||||| || || |||| Sbjct 4275 GATAATTGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCGTAAAGAAC 4216 Query 107219 ATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATG 107278 | ||| ||||| | || || || ||||| || | ||| | | || ||| ||| Sbjct 4215 TT---TTGTGACATGTGTTCATACGTTTCCAAAACGGCATCCAAATTCTCTTTGTGTATG 4159 Query 107279 CCGATGGCCACACGCATAAACATGTATTG-GGGTGTT 107314 |||| ||||| ||||| | ||| | ||| ||| ||| Sbjct 4158 CCGACAGCCACTCGCATTATCATATGTTGTGGGCGTT 4122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589892826487960