Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq9328 118 1e-21 >seq9328 Length=51123 Score = 118 bits (130), Expect = 1e-21 Identities = 272/399 (68%), Gaps = 8/399 (2%) Strand=Plus/Plus Query 159388 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCA 159447 |||||||| ||||| ||| ||| || |||||||| ||||| || || || ||||| Sbjct 43076 AATGTATGCTTGATTCCAATGTCTGCTCATGGAACGAATCCAGCTAGTGCGGTAATGGCT 43135 Query 159448 GGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGA-CATCAAAGATCT 159506 || ||||||||||| | ||| ||| || || | || || || || | || | ||| | Sbjct 43136 GGTATGAAAGTTGTGGTCGTCCAGTCAGACGACAAGGGGAATATCGATCGTC-AGGATTT 43194 Query 159507 AGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATC 159566 ||| || ||||| | | | | || |||| || | | ||||| || || ||||| Sbjct 43195 AGAAAACAAAGCGAAAAAGCACGCAAATGAATTGAGTGCTCTCATGATCACCTACCCATC 43254 Query 159567 TACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAG-ATTG-TTCATGAGAAT 159624 || ||||||| || | | ||| | | |||||| | | |||| | || | || Sbjct 43255 CACGTATGGTGTCTTCG-AGCAAGGAGTCCA-AGATATCTGCGCATTGATCCACTCGTAT 43312 Query 159625 GGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCT-AGCAAAACC 159683 ||||| || || || | ||||| || ||| | |||||||| || || || |||| | Sbjct 43313 GGTGGCCAAGTGTACATGGATGGAGCGAATATGAATGCACAAGTCGGCCTGTGCAATCCG 43372 Query 159684 ATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACA 159743 | | | ||| || ||||| || ||||| || | || || |||||||| || || || Sbjct 43373 AAAT-CCATTGGAGCTGATGTCTGCCATCTCAATCTCCACAAAACATTCTGCATCCCTCA 43431 Query 159744 TGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGC 159782 || ||||| ||||| || || || | ||||| ||||| Sbjct 43432 CGGTGGTGGTGGTCCAGGAGTTGGAACCATTGGCGTAGC 43470 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAG 157941 || || ||||| || ||| |||||||||| | || || || || ||| | || ||| Sbjct 41513 ATCGGCCAAGGGTATCATGACTGCATCACACCCGCGGTTATCCAACGTAACATGCTGGAG 41572 Query 157942 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 158001 ||||| | ||||| ||| | || || || || ||||||||||| || || || ||||| Sbjct 41573 AATCCGGGCTGGTATACAGCGTATACGCCGTACCAAGCTGAGATCTCACAAGGTCGATTG 41632 Query 158002 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAAC 158061 ||| | | |||| || || | | ||| ||||||||| | | | || Sbjct 41633 GAAATGCTGCTGAATTTTCAGACAGTGGTTCAAGATCTCACAGGATTGGAATTCTCGAAT 41692 Query 158062 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || || || ||||||||||| || || ||||| ||||||||| Sbjct 41693 GCGTCACTTTTAGATGAAGCGACAGCTGCAGCTGAAGCAATG 41734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587963514215440