Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6751 95.1 8e-15 >seq6751 Length=68926 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||||||||| || |||| ||| ||||| | || || || |||||||| || || Sbjct 5283 TTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCCGTCTTCTAGTTGTTTTCCAGCGAA 5224 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || |||||||| || | || | || |||||||| |||||| || ||| Sbjct 5223 GATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCTTCGCCTTCACGTT 5164 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || | ||| || || | ||||||||||| || || || ||||| || Sbjct 5163 GTCAATAGTGTCCGATGACTCGACTTCCAAAGTTATGGTTTTCCCAGTCAGCGTCTTAAC 5104 Query 34970 AAAGATCTGCAT 34981 ||| || ||||| Sbjct 5103 AAAAATTTGCAT 5092 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||| || |||| ||| | ||| | || ||||| ||||| |||||||| Sbjct 5738 TCTTTCTGAATGTTGTAATCCGCAAGCGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAA 5679 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 ||||| |||||||||||| | || | || || ||||| |||||| || || || Sbjct 5678 ATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGGATCTTCGCCTTCAC--AT 5621 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || | || || || | || || ||||| || || || ||||| Sbjct 5620 --TGTCGATAGTATCTGAAGATTCCACTTCCAACGTAATAGTTTTCCCAGTCAGCGTCTT 5563 Query 34967 CACAAAGATCTGCAT 34981 ||||| || ||||| Sbjct 5562 AACAAAAATTTGCAT 5548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324586403245512