Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq73 201 9e-46 seq102 197 1e-44 seq6751 136 3e-26 seq7243 125 6e-23 seq1165 125 6e-23 seq2147 102 7e-16 seq1175 95.1 1e-13 seq1823 93.3 3e-13 >seq73 Length=42519 Score = 201 bits (222), Expect = 9e-46 Identities = 411/603 (68%), Gaps = 17/603 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || ||||| ||| | || || || || ||||| ||||| |||||||||| | Sbjct 1804 AGCAATTGGTATTGATCTTGGTACAACTTACTCATGTGTGGGTGTCTGGCAAAATGATCG 1745 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||||||||| || || ||||| ||| |||| ||||| || || ||| ||||||| Sbjct 1744 AGTCGAAATTATTGCTAACGACCAAGGAAACCGAACCACTCCGTCCTACGTTGCTTTCAC 1685 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTAC 550167 || ||||||| | | |||||||||| || ||| | || ||||| || || | | Sbjct 1684 CGACACTGAACGTCTTATTGGTGATGCCGCTAAAAACCAAGTAGCCA-TG--AACGCAGC 1628 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 || || | || || || |||||||| ||||| ||| |||| || | | || || Sbjct 1627 AAACACCGTCTTCGACGCCAAACGTTTGATTGGTCGAACTTTTTCGGACCCAATCGTCCA 1568 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGG---AAAACCTTATAT 550284 || || |||||||| ||||| ||| | || || | |||| || || | || Sbjct 1567 AGCTGACATGAAGCACTGGCCATTCACAGTTCAAAACGGACCTGGCAACAAGCCCTTGAT 1508 Query 550285 TGAAGCTACTCATGAAGGATCTGTTAAACAATTTTC-ACCAGAACAAATTTCATCTATGG 550343 |||| || | | |||| | || | ||||| ||| ||| ||||||| || |||| Sbjct 1507 CGAAGTCAC-CTTTAAGGGTGAAAAGAAAATTTTTCAACCTGAAGAAATTTCCTCAATGG 1449 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 | | | || ||| || | || | | || | |||| | | |||| | Sbjct 1448 TGCTCGTAAAGATGCGTGAAGTCTCTGAAGCGTACATCGGAAAGCAAGTGAAGAATGCCG 1389 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | || || ||||||||||| || || || || |||||||||||||| ||||| || || Sbjct 1388 TCATCACCGTACCAGCATACTTCAACGATTCCCAACGTCAAGCTACCAAAGACGCGGGTG 1329 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 || || || | || || ||||| || ||||||||||| ||||| ||||| |||| | Sbjct 1328 CGATCGCCGGTTTGAACGTGCTTCGAATCATCAATGAACCAACTGCAGCTGCCATTGCGT 1269 Query 550524 ATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGA---TTGTGGAG 550580 | || | || | | || | ||||||| ||||| |||||||| || | |||||| Sbjct 1268 ACGGTTTAGAGA---AGAAAGGTCAAGAATGCAATGTGCTCATCTTCGATCTTGGTGGAG 1212 Query 550581 GTA 550583 ||| Sbjct 1211 GTA 1209 >seq102 Length=19248 Score = 197 bits (218), Expect = 1e-44 Identities = 377/546 (69%), Gaps = 17/546 (3%) Strand=Plus/Minus Query 549993 CTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAG 550052 || |||| || ||| | ||||| || || || |||||||| |||||||||| | || Sbjct 5703 CTGTAGGCATTGATCTTGGAACAACGTACTCATGCGTTGGTGTGTGGCAAAATGATCGAG 5644 Query 550053 TTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG 550112 | || || ||||| |||||||| || || |||| || || || ||||| |||| || | Sbjct 5643 TCGAGATCATTGCGAATGATCAGGGAAATCGAACGACACCTTCGTATGTCGCTTTTACAG 5584 Query 550113 AAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 | || || | | | | ||||||| ||||| || | |||| || ||| | || || Sbjct 5583 ATACGGAGAGACTGA-TTGGTGACGCAGCGAAGAACCAAGTGGCTATGAATGCAACAAAC 5525 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 ||| |||| || || ||||| || ||||| || ||| || |||| | ||||| || Sbjct 5524 ACTGTTTTCGACGCGAAACGATTGATTGGTCGACGTTGTAGTGATCCTGTGGTTCAAGCT 5465 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTG--GAAAACCTTATATTGA-- 550287 ||||| || |||||||||||| || |||| | | || | | || | ||| Sbjct 5464 GATATCAAACATTGGCCTTTCAAA---GTTACTTCTAGTGAAGGAGACAAGACGATGATT 5408 Query 550288 AGCTACTCAT--GAAGGATCTGTTAAACAAT--TTTC-ACCAGAACAAATTTCATCTATG 550342 | | | || |||| || | | ||| |||| ||| ||| | || || || ||| Sbjct 5407 ACCGTCCAATACAAAGG---TGAAACAAAATCCTTTCGACCGGAAGAGATATCTTCAATG 5351 Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCA 550402 |||||||| ||||||| | ||| ||| |||||| | ||| |||| || | | || Sbjct 5350 GTTTTAATCAAAATGAGAGAAATTGCCGAAGCTTTTCTCGGTAAAGATGTCAAAAACGCG 5291 Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462 || || |||||||| ||||| ||||||||||| || ||||| || || || || || || Sbjct 5290 GTTATTACTGTACCTGCATACTTTAATGACTCGCAGCGTCAGGCGACCAAGGACGCAGGC 5231 Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCA 550522 ||||| || | ||||| || ||||| || ||||| || ||||| || || | || Sbjct 5230 GCGATTGCAGGGTTAAATGTGCTGCGTATAATTAATGAGCCAACTGCAGCGGCTATCGCG 5171 Query 550523 TATGGA 550528 |||||| Sbjct 5170 TATGGA 5165 Score = 181 bits (200), Expect = 9e-40 Identities = 564/857 (66%), Gaps = 37/857 (4%) Strand=Plus/Minus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTT 551846 ||| ||| | ||| | || || ||||||||||||||| |||| || ||||| | |||| Sbjct 5051 TGGTGATACACATTTGGGCGGAGAAGATTTTGATAATCGACTAGTCGATCAT--TTTGTT 4994 Query 551847 GAAGATTTTAAACGAAAAAAC--AAAGTTGATCTATCTACATCTGCCAAAG--CTCTTCG 551902 | || || || |||| | |||| ||| | | ||| | ||| | | ||||| Sbjct 4993 GCCGAATTCAACAGAAAGCATCGAAAG--GATATTACAACAAAT--CAACGTGCACTTCG 4938 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAAC-CA 551961 |||||| | || ||||| || |||| || || | ||||| || ||||| | || Sbjct 4937 CCGTCTACGCACAGCTTGTGAGCGAGCAAAGCGCACCCTTTCTTCATCCGCTCAAGCACA 4878 Query 551962 CTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCA 552021 | |||||| | || || | || |||||| | |||| ||| | | || ||||||| Sbjct 4877 C-ATTGAAATTGACTCGCTGTTCGAGGGAGTGGATTTCAATTCTACAATCACGAGGGCAC 4819 Query 552022 AATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT 552081 ||| |||||| | ||| | ||| ||| | |||||| |||||||| || | || | Sbjct 4818 GATTCGAAGATTTATGTGCAGATTACTTCCGTCGAACAATGGAACCAGTGGAGAAGGTGT 4759 Query 552082 TAAGAGATTCAAAGATTG--ATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATC 552139 | | ||||| || |||| | ||| || || || ||| |||| || || ||||| || Sbjct 4758 TGCGTGATTCTAA-ATTGTCAAAAAGTCAG-GTGCACGAAGTTGTACTCGTGGGTGGCTC 4701 Query 552140 TACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTA---TTTCAATGGTAAAAAATT 552196 || | ||||||||| | | || | || ||| | |||||| ||||| |||| Sbjct 4700 GACTCGTATTCCTAAAGTGC---AACAGCTATTGTCTGAGTTTTTCAACGGTAAGGAATT 4644 Query 552197 AAATGAAAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT 552254 || |||| | || || || || || || || | |||||| | | ||||| || Sbjct 4643 G--TGCAAGTCGATAAACCCGGACGAAGCCGTCGCTTTTGGTGCAACTGTACAAGCCGCC 4586 Query 552255 ATTCTTTCTGGACAAACTGAT------GAAAAACTACAAAATATTGTACTTGTAGATGTT 552308 ||| | |||| ||||| ||||| || || || | |||| | |||||| Sbjct 4585 ATTTTAAGTGGA---ACTGAGCAATCCGAAAAGCTGCAGGATCTATTACTGTTGGATGTT 4529 Query 552309 ACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGA 552368 |||| || || || || | || |||| || || | ||||| | || ||| | Sbjct 4528 GCTCCGCTGTCGCTGGGACTTGAGACAGCGGGTGGAGTGATGACCACACTGATCCCACGT 4469 Query 552369 AATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACT 552428 ||||| || | ||| ||||| |||| | ||||| || || ||| || || | Sbjct 4468 AATACCACGCTACCTACGAAAAAGTCTCAAATGTTTTCAACATACCAAGAAAACCAGCCA 4409 Query 552429 GCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT 552488 | ||| || ||| | ||||| ||||| | | ||| || || || | || Sbjct 4408 GGTGTATGCATACAAGTATTTGAGGGAGAGCGCTCCATGACTCGGGACAACAACCTTCTC 4349 Query 552489 GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTT 552548 || | || ||| | || || || || || || || || ||||| ||||||||||| Sbjct 4348 GGAAAGTTCAATCTTGACGGAATACCGCCCATGCCGCGCGGTGTACCTCAAATTGAAGTC 4289 Query 552549 ACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAAC 552608 || |||||||||||||||||||||||||||||||| | || || ||||| | |||| Sbjct 4288 ACATTCGATATCGATGCCAATGGAATTTTGAATGTAAGCGCGATCGAGAAATCGACCAAC 4229 Query 552609 AAGAGTAAAAATATTAC 552625 ||| || || ||||| Sbjct 4228 AAGGAAAATAAGATTAC 4212 >seq6751 Length=68926 Score = 136 bits (150), Expect = 3e-26 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| ||||| |||||||| ||| ||||| ||| |||||||| || || || | | Sbjct 5765 AGACGAAGTACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTGCGT 5706 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| |||||||| ||||||||||| || | |||||| || ||||||||||||||| Sbjct 5705 CCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCT 5646 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || || || || || || || || || ||||| | || | || ||| | || Sbjct 5645 TTGTCCTGGATCTTCGCCTTCACATTGTCGATAGTATCTG-AAGATTCCACTTCCAACGT 5587 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || |||||| ||||| || || ||||| ||||||||||| Sbjct 5586 AATAGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCAT 5548 Score = 111 bits (122), Expect = 1e-18 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| || ||||| | | ||||| ||||||||||| || || || || | | Sbjct 5045 ATGTTGTAATCCGCAAGAGTACGTCCGTCTTCTAGTTGTTTTCCAGCGAAGATCAGACGT 4986 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 |||||||||||||||||||||||||| |||||||| || ||||| || || || Sbjct 4985 TGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCCTTTACATTATCGATCGTG 4926 Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | || | | ||| | ||| | || || |||||||| ||||| || ||||| || Sbjct 4925 TCTG-AAGACTCAACTTCCAAAGTGATGGTCTTTCCAGTAAGCGTTTTCACAAAAATCTG 4867 Query 563472 CAT 563474 ||| Sbjct 4866 CAT 4864 Score = 111 bits (122), Expect = 1e-18 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| |||||||| || || |||| | ||||| ||||||||||| || || Sbjct 5283 TTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCCGTCTTCTAGTTGTTTTCCAGCGAA 5224 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 || || | |||||||||||||||||||||||| || || || || || || || Sbjct 5223 GATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCTTCGCCTTCACGTT 5164 Query 563403 CTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||| || || | ||| | | ||| | ||| | ||||| ||||| || || |||| Sbjct 5163 GTCAATAGTGTCCG-ATGACTCGACTTCCAAAGTTATGGTTTTCCCAGTCAGCGTCTTAA 5105 Query 563462 CGAAAATTTGCAT 563474 | ||||||||||| Sbjct 5104 CAAAAATTTGCAT 5092 Score = 98.7 bits (108), Expect = 8e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| || || |||| | ||||| |||||||| ||||| || || || | | Sbjct 5501 ATGTTGTAATCCGCAAGCGTTCGTCCGTCTTCTAGTTGTTTACCGGCGAAGATCAGACGT 5442 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 ||||||||||||||||||||||| || || || || || || || ||||| || Sbjct 5441 TGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTG 5382 Query 563413 TCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | || ||| ||| | ||| | |||||| ||||| | ||||| || || || || Sbjct 5381 TCTGATGACTCTAC-TTCCAAAGTTATAGTTTTTCCAGTCAAGGTTTTCACAAATATCTG 5323 Query 563472 CAT 563474 ||| Sbjct 5322 CAT 5320 >seq7243 Length=62607 Score = 125 bits (138), Expect = 6e-23 Identities = 393/599 (66%), Gaps = 20/599 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 || ||| ||||| ||| | ||||||||||| ||||| ||||| ||| || |||| | Sbjct 38253 AGTTATTGGTATCGATCTGGGAACCACATACTCCTGTGTGGGTGTATGGAAAGATGGCCA 38194 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| || || ||||| ||| | |||| ||| | || || || |||| || | || || Sbjct 38193 AGTAGAGATCATTGCTAATACTGAAGGAAACCGTACAACGCCTTCTTGGGTCGCATTTAC 38134 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAG-CAAAATATCAAGCCACTGGTAATCCTACCA 550169 || | || | || ||||||| |||| ||||||| ||||| || || || || | Sbjct 38133 CGACAGCGAGCGATTGATTGGTGAGGCAGCCAAAATA-CAAGCGGCTTCCAACCCAACAA 38075 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | ||| |||| || || || ||| | ||||| ||||||||| ||| |||| || Sbjct 38074 ACACTGTTTTCGACGCGAAGCGTATTATTGGTAGAAGTTTTGCCGATGAAGCTGTGCAAC 38015 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGT---TAATGTTTCTGGAAAAC--CTTATAT 550284 ||| |||||| || ||| |||| || || | || |||| ||||| Sbjct 38014 GTGATGCTCAGCATTTCCCATTCAAAATCGTATCGGGTGATGATGACAAACCACTTATTC 37955 Query 550285 TGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGT 550344 | | | ||| || || ||||| || |||| ||| |||| || ||||||| Sbjct 37954 AGGTGGAATTCAAAAAAGA--GACAAAACAGTTCACACCTGAAGAAATCTCTGCTATGGT 37897 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 | | | ||||||| |||| || || | | || || | | | || || Sbjct 37896 GCTCACGCGAATGAAAGAAACCGCTGAAGCATACCTCGGACAGCCCATCAAACAAGCGGT 37837 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | || || || || ||||| |||||| ||||||||| | || |||||||| ||| Sbjct 37836 TGTGACCGTCCCTGCGTATTTCAATGACCACCAACGTCAATCGACCAAAGATGCCGGATC 37777 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 |||||||| | | || || || |||||||| || ||||| ||||| | || || Sbjct 37776 GATTGCTGGTTTAGACGTGAAGCGAATCATCAATGAGCCCACTGCAGCTGCCTTGGCGTA 37717 Query 550525 TGGACTTGATA--AAC-----ATAATGAT--CAAGAACT-TAATGTACTCATCTTTGAT 550573 || ||||| | ||| || |||| ||| || |||||| |||||||||||| Sbjct 37716 CGGTCTTGACACCAACGCTGGAT-CTGATGGCAAAGCCTGTAATGTGCTCATCTTTGAT 37659 >seq1165 Length=17156 Score = 125 bits (138), Expect = 6e-23 Identities = 366/553 (66%), Gaps = 17/553 (3%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| || || ||||| ||||||||||| |||||||| || || | || ||||| Sbjct 4229 TATTGGAATCGATTTGGGAACCACATACAGTTGTGTCGGATATTACAAGAACAAGAAAGT 4288 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113 ||||| || | ||||| ||||| || | || || || || || ||||| | Sbjct 4289 GGAAATCATCCCAAATGAGCAAGGAAATCGTGTCACCCCGTCCTACGTGGCTTTCGACGC 4348 Query 550114 AACTG-AAC---ATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCT-ACC 550168 |||| ||| ||| | | |||||||| || || |||||||| | || || | | Sbjct 4349 GACTGGAACTCGATTGA-TCGGTGATGCGGCCAAGAATCAAGCCGTTCACAACCCCGAGC 4407 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || || ||||| || | ||||| | ||||| ||| |||| || | ||||| Sbjct 4408 AA-ACGATTTTCGACGTGAAACGACTTATTGGTCGAAAGTTTACGGACAAATCCGTTCAA 4466 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 ||||| | ||||| || | | | ||| | || ||||| || | ||| Sbjct 4467 GCAGACAAGAAGCTACTTCCGTACGAGATTATCAACAAAGACGGAAAGCCATTCATTCGC 4526 Query 550289 GCTACTCATGAAGG---ATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTT 550345 | ||| |||||| | | | ||| || |||| ||| |||| || | |||||| Sbjct 4527 GTTACAG-TGAAGGGAGAACAG--AAAGTTTTCGCACCTGAAGAAATCTCGGCCATGGTT 4583 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA--GTTACGGATGCAG 550403 | ||||||||| | | || || |||| || || || | |||||| | Sbjct 4584 CTCCAGAAAATGAAGGATATTGCTGAGAAAGTTATTGG--AACAACTGTGAAGGATGCTG 4641 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | | ||||| ||||||||||| || || | ||||||||||| || |||||||||||| Sbjct 4642 TGGTCACTGTCCCAGCATATTTCAACGATGCTCAACGTCAAGCAACCAAAGATGCTGGAT 4701 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 ||| |||||| | | |||| ||||| |||||||| || || |||||||| |||| | Sbjct 4702 CTATCGCTGGATTGACCGTTCAACGTATCATCAATGAGCCAACAGCTGCTGCGATTGCTT 4761 Query 550524 ATGGACTTGATAA 550536 ||||| |||| || Sbjct 4762 ATGGAATTGACAA 4774 >seq2147 Length=4812 Score = 102 bits (112), Expect = 7e-16 Identities = 191/281 (68%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362 ||||| ||||| | || || || | ||||| | || ||| | | ||||| || || Sbjct 1954 GATGTGACTCCATTGTCGCTCGGAATTGAAACGTTAGGCGGTGTGTTCACTAAACTGATA 1895 Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422 |||| || || |||||| ||||| || | ||||| |||||| | ||| Sbjct 1894 CCGCGAAACACAACCATTCCTACAAAAAAGTCGCAAGTATTCTCTACGGCCGCGGATTCA 1835 Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482 || ||| ||| || || | || | || ||| || || | || |||||| || Sbjct 1834 CAGACTCAAGTTGGTATCAAAGTGTTACAGGGCGAACGAGAAATGGCTGCAGATAACAAA 1775 Query 552483 CAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATT 552542 || || | ||| |||| | ||| ||||| ||||| || ||||| ||||| |||||| Sbjct 1774 TCGCTCGGAAACTTTGATTTGGTAGGAATTCCACCTGCACCGCGTGGTGTACCTCAAATT 1715 Query 552543 GAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 ||||| | |||||||||||||| ||||| || ||||||| Sbjct 1714 GAAGTGTCGTTCGATATCGATGCGAATGGTATCGTGAATGT 1674 >seq1175 Length=41999 Score = 95.1 bits (104), Expect = 1e-13 Identities = 261/398 (66%), Gaps = 9/398 (2%) Strand=Plus/Plus Query 368608 TTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGTTTGTATA 368667 || |||||||| ||| | || | ||| ||| ||| || || |||| || || Sbjct 30907 TTCTGGGGAACGCCACTACCCCTTTGGGTCAGTGAAGATTACGAGGAGGTTGTGTGCGTA 30966 Query 368668 GGTTCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGTGATTTACATATT 368727 || || ||| || | |||||||||| |||| |||| | ||| | ||| Sbjct 30967 GGCTCTATTTCCGAGCTTGAAGAATTATCGGGTG---AAAAAGTCGAAGATCTGCATCGC 31023 Query 368728 GATAAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTTATTGTCTCGAGTT 368787 || | || || || || | || |||||| |||| || || | ||| |||| Sbjct 31024 GAATATATCGACCATATAACGATACCATCACGCCAAGGGAATGGAGTTTTGCGCAGAGTA 31083 Query 368788 GAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTAT 368847 || ||| || ||||||||||||||| || || ||||| || | || |||| ||| Sbjct 31084 CCAGAAGTCTTTGATTGCTGGTTTGAAAGTGGATCGATGCCGTACGCCCAGCTACACTAT 31143 Query 368848 CCATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACA 368907 |||||||| ||| | | | || || || |||| | ||| |||||| | | Sbjct 31144 CCATTTGAAAACCAAGACAAGTTCGAAGCTG-----GATT-TCCGGCAGATTTTATCGCG 31197 Query 368908 GAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATT 368967 ||| |||||||||| ||||| ||||||||||| || | || |||| ||||| | Sbjct 31198 GAAGGTCTTGATCAAACTCGTGGATGGTTTTATACGCTTATGGTTATATCTACAGCCTTA 31257 Query 368968 TTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGG 369005 |||||||| || || || || ||| | || || | ||| Sbjct 31258 TTCGATAAGCCAGCATTCAAGAATCTCATTGTCAATGG 31295 >seq1823 Length=40296 Score = 93.3 bits (102), Expect = 3e-13 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 |||||||||||||||||||||||||| || | ||| || ||||||||||||||||| || Sbjct 10747 TCTTCAAGTTGTTTTCCGGCAAAAATTAGACGTTGTTGGTCAGGAGGAATTCCTTCCTTG 10806 Query 563380 TCTTGAATTTT 563390 |||||||| || Sbjct 10807 TCTTGAATCTT 10817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028665140680210