Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq3366 264 1e-65 >seq3366 Length=157547 Score = 264 bits (292), Expect = 1e-65 Identities = 593/878 (68%), Gaps = 16/878 (2%) Strand=Plus/Plus Query 36890 ATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCAT 36949 |||||||||||| ||| | || ||||| ||||| ||||||| || || || | ||||| Sbjct 38969 ATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCAT 39028 Query 36950 AAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAGA-AGCC 37008 | ||||| |||||||| | | ||||| | || | | || | | | | | | Sbjct 39029 CCAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTG-ACGCCAAGTGCATGTAACAATC 39087 Query 37009 TATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTA 37068 |||||| ||||| || ||||||| || ||| | | || || |||||||| | | Sbjct 39088 GATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGA 39147 Query 37069 CTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128 |||||| || |||| | | |||| || ||| || || || || || || || | Sbjct 39148 CTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCAT 39207 Query 37129 CAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAA--ACAATAAACATGCAAAATC 37186 |||| |||| | | | ||||| | || | ||| | ||||||||| || Sbjct 39208 GAATAGAGCCTTCTG--GAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAAGTC 39265 Query 37187 ACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAA 37246 |||||||| |||||||| | ||| || | ||||| |||||| | ||| ||||| || Sbjct 39266 ACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAA 39325 Query 37247 ACCTCtttttttAATCCAAAATATTGCTGCAAAA-GATCCAGAAAAGAAAATACCTTCAA 37305 |||| ||| || | ||||||||| | ||| || ||||| || || || || ||||| | Sbjct 39326 TCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGATTCCTTCGA 39384 Query 37306 CTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA--CTATA-ATCAGAAATCCAtt 37362 | || ||||| ||||| | | | | || | | | || | ||| | ||||| Sbjct 39385 CGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCA---CCATT 39441 Query 37363 tttttGTCCAATCTGCCTTTAATT-TAACACATTCAATTGTTTCAATTGCTTTTAAGAGA 37421 | | ||| | ||| |||| | |||| || ||||||||||| || || | | Sbjct 39442 TCAACGCCCATTGTGC-TTTATTGGTAACGCACGGGATTGTTTCAATCGCGCATAGTAAA 39500 Query 37422 AAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAG 37481 | |||||| |||| | || || |||||||| | ||| ||||| ||| ||| Sbjct 39501 TGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAG 39560 Query 37482 TGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACA 37541 || |||||||| || || || || || |||||||| || | |||||| | | |||||| Sbjct 39561 TGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGATTTGAACC 39620 Query 37542 TCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAA 37601 || | || || | || | ||||||||||| ||||||||||| ||||||||||| Sbjct 39621 TCACTGCTGAAATTCATGGCGAGATTTTCATTAACAATCCCATCACTGGCTGCAAAGAAG 39680 Query 37602 GCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATA 37661 || | || | ||| ||||| ||||| |||| | |||| || ||| ||||| || Sbjct 39681 GCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATATTAAGCCAGTCATTCATG 39740 Query 37662 TCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATC 37721 || | ||||| | ||| || |||||||||| |||||| ||| |||||||| Sbjct 39741 TCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACATG 39800 Query 37722 GTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759 |||||| ||| |||||||| ||||||| ||||| Sbjct 39801 TCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAA 39838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592228478161160