Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq6751 98.7 8e-16 >seq6751 Length=68926 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| ||||| |||||| ||||| |||||||| | || | || |||| ||| Sbjct 5756 ACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTGCGTCCGTCTTCC 5697 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | || ||||||||||| || || || || || || | |||| || || ||||| Sbjct 5696 AGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGG 5637 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | || ||||| | ||||| |||| |||||| ||||| Sbjct 5636 ATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCACTTCCAACGTAATAGTTTTC 5577 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||| || || |||||||| ||||| Sbjct 5576 CCAGTCAGCGTCTTAACAAAAATTTGCAT 5548 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| || || |||||||| | ||| | || |||| || | || || || || || Sbjct 5054 TCTTTCTGGATGTTGTAATCCGCAAGAGTACGTCCGTCTTCTAGTTGTTTTCCAGCGAAG 4995 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 ||||| || || ||||| | |||| || || ||||| |||||| |||||| | Sbjct 4994 ATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCCTTTACATTA 4935 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||| | ||| || |||| || || || ||||| || | ||||| ||| Sbjct 4934 TCGATCGTGTCTGAAGACTCAACTTCCAAAGTGATGGTCTTTCCAGTAAGCGTTTTCACA 4875 Query 48756 AAAATCTGCATCGTG 48770 ||||||||||| ||| Sbjct 4874 AAAATCTGCATGGTG 4860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380882217506067