Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3366 113 8e-20 >seq3366 Length=157547 Score = 113 bits (124), Expect = 8e-20 Identities = 379/580 (65%), Gaps = 20/580 (3%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACT---GGACCGCCGAAGAGATT 25530 || || ||||| ||||| ||||| || | | ||| || ||||||| ||||| || Sbjct 39811 GAGATTTGGGACATGTATAAGAAAGC---AGAGGCAAGCTTTTGGACCGCAGAAGAAATC 39755 Query 25531 GATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTC 25590 ||| ||| | |||||| | | |||| | |||| | | ||| || ||| || Sbjct 39754 GATTTGGTGCATGACATGAATGACTGGCTTAATATATCGGACAATGAGAGACACTTTATC 39695 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 || |||||||||| |||||||||||| |||||| || || || || ||||| | | Sbjct 39694 AAACACGTGTTGGCCTTCTTTGCAGCCAGTGATGGGATTGTTAATGAAAATCTCGCCATG 39635 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| ||| || || || | ||| || || || || || ||||| || || Sbjct 39634 AATTTCAGCAGTGAGGTTCAAATCCCGGAAGCTCGATGCTTTTATGGATTCCAAATTGCA 39575 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGAC 25767 || |||||| | ||||| || |||||| | | | |||| || ||||| | ||| Sbjct 39574 ATAGAAAATATACACTCGGAAGTGTATTC---GTTATTGATTGATACATACATCAAAGAT 39518 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 |||| | | | | | | | || || || || || || | | | || Sbjct 39517 CCAACCGAAAAACAGCATTTACTATGCGCGATTGAAACAATCCCGTGCGTTACCAATAAA 39458 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG--CGCTACGTTTGGCGAGCGGCTGG 25885 || | ||||| |||| ||| | | ||| || || |||||| || | ||| Sbjct 39457 GCACAATGGGCGTTGAAATGGTGC--GATCCAAAGTATGCCTCGTTTGCAGAAAGAGTGG 39400 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGG 25944 |||||||||| || || || || ||||||||| ||| || || ||| | || || ||| Sbjct 39399 TAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGC-TCTATATTTTGG 39341 Query 25945 CTCAAGCAGAAGGGGA-CCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 || ||| | | | ||| ||||| || || | |||||| || ||||||||||| | || Sbjct 39340 CTGAAG-AAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATCAGTCGTGA 39282 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACG 26043 || || || || | || ||||| || ||| | ||| || Sbjct 39281 TGAAGGACTACATTGTGACTTTGCATGTCTGATGTACTCG 39242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928706297629760