Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq113 163 1e-35 >seq113 Length=12257 Score = 163 bits (180), Expect = 1e-35 Identities = 317/468 (68%), Gaps = 0/468 (0%) Strand=Plus/Minus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 || |||||||||||| ||| || || | || || | |||||| | ||| || Sbjct 4689 TTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGG 4630 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008 ||||| | |||||||||||||||| |||| ||| ||||| |||||||| | Sbjct 4629 ATCCAAAGAGCATAAAATAAATCTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACGT 4570 Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068 || || | || ||||| ||||| | ||||| || |||| ||| || |||||| ||| Sbjct 4569 AGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGACCCT 4510 Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128 || | || || ||||||||||| ||||||| || || |||||||| || | |||| Sbjct 4509 TTCCGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATT 4450 Query 26129 GGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATA 26188 ||||| | |||| | ||| ||| || || | |||| | || || | |||| Sbjct 4449 GGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGTTGGTGGAGCGAATA 4390 Query 26189 TCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACT 26248 | | | | | || || || |||||||| ||||||||| ||||| | | | Sbjct 4389 TTGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATTGTTTCAGC 4330 Query 26249 GTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAAT 26308 || ||| |||| || | || |||| ||| ||| ||||| |||||| || |||||| Sbjct 4329 GTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAAAACACGACGATAAT 4270 Query 26309 TGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTA 26356 || | ||| ||||| | ||| || | ||||| || ||||| ||| Sbjct 4269 TGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCGTA 4222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253003211858675