Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq113 161 1e-34 >seq113 Length=12257 Score = 161 bits (178), Expect = 1e-34 Identities = 673/1048 (64%), Gaps = 33/1048 (3%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 |||||| | ||| | ||||| || || ||||||| ||| || | | ||| | || Sbjct 4126 CCCACAACATATGATAATGCGAGTGGCTGTCGGCATACACAAAGAGAATTTGGATGCCGT 4185 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATT---CACGCAACACCAACCCT 75327 ||||| || || || | ||||| ||| | |||| || || ||||| || || || Sbjct 4186 TTTGGAAACGTATGAACACATGTCACAA---AAGTTCTTTACGCATGCAACTCCGACGCT 4242 Query 75328 CTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 75387 |||||||| || || || |||| || | || || || || | ||| | || Sbjct 4243 TTTCAATGCGGGAACGCCTCGACCCCAATTATCGTCGTGTTTTCTATTATCCATGCAAGA 4302 Query 75388 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 75447 || || ||| |||| || || | || || | | |||||| || ||||||||||| Sbjct 4303 TGATTCTATCGACGGCATTTACGACACGCTGAAACAATGTGCGTGTATTTCAAAGTGGGC 4362 Query 75448 TGGGGGTATTGGGAT--GCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 ||| |||||||| | | | |||| || | | ||| || | |||||| ||| Sbjct 4363 TGGCGGTATTGGCGTCAGTATTTCCA--ATATTCGCTCCACCAACAGTTATATTCGCGGG 4420 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || ||||| || |||| ||| ||||||||||||| || || || | |||||| || Sbjct 4421 ACGAATGGAAGTTCGAATGGAATTGTTCCAATGCTTCGGGTGTTCAATGACACAGCTCGA 4480 Query 75566 TATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || || |||||| || | || || ||||| | || | || | || || ||| Sbjct 4481 TACGTTGATCAAGGTGGTGGGAAGCGGAAAGGGTCTTTTGCAATTTATCTAGAGCCCTGG 4540 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 ||||| |||||| | ||||| || || |||| || || || | ||| ||| Sbjct 4541 CATGCGGATATCTTTGAGTTTCTGGAACTACGTAAGAATCATGGAAATGAACTCCATCGA 4600 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 ||||| | |||| | || ||||| || || || || ||||| || || || || Sbjct 4601 GCACGAGATTTATTTTATGCTCTTTGGATCCCCGATCTGTTTATGAAACGTGTGGAAGAC 4660 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 ||||| | | |||||||| || |||| ||| | || | || | |||| Sbjct 4661 AACCAAGAATGGAGTTTATTCTGTCCGAACGAGGCTCCACGACTTTATGAGACA-TGGGG 4719 Query 75803 GAG-GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 || || ||||| || | || |||||| || | | ||| |||||| Sbjct 4720 AAGCGAATTTGATGCGTTATATGAAAAGTACGAGTCTCAAAACATTGCCCGAAAGACTGT 4779 Query 75862 ACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 |||| | | ||| || ||| | | |||| ||||| ||||| || || Sbjct 4780 CAAAGCCCAGCAATTGTGGTTTGCCATTTTGGATAGTCAGATTGAGACCGGAACGCCGTA 4839 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 |||||||||||| || |||||||| || || || ||||| | ||||| || Sbjct 4840 TATGCTTTACAAAGACGCTTGTAATCGTAAATCCAATCAGCAGAATCTTGGAACCATTC- 4898 Query 75982 GAGCTCAA---ATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 | |||| |||| ||| ||||| | |||||| |||| | || ||| || Sbjct 4899 --GATCAAGCAATCTCTGCTGTGAAATCATCGAGTACTCAGACTCCAAAGAAGTGGCAGT 4956 Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGA 76098 ||||||||||| || ||||| | |||| | ||| || | || | | | ||| | Sbjct 4957 ATGCAATTTGGCTTCCATCGCATTGTCAAAATTTGTGTATCA-GAAA---GAA--TTTCA 5010 Query 76099 TTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGA 76158 | || |||| | | ||||||||||| || ||||| |||||||| ||| | ||||||| Sbjct 5011 GTTTGCAAAATTATACGAAATCACAAAAATCGTTACGAAAAATCTCAACAAAATCATTGA 5070 Query 76159 CAGAAATTTTTATCCCGTTGAGACTG-CGCGAAAGT--CTAATATGCGACACAGACCTAT 76215 |||| |||||| || ||| || |||| ||| |||||| |||| || Sbjct 5071 TCTCAATTATTATCCGATT---CCTGAAGCACAAGTGAGCAATCAGCGACATCGACCGAT 5127 Query 76216 TGGTTTGGGTGTTCAAGGTCTCGCGGAT 76243 ||| | || ||||||||||| || ||| Sbjct 5128 TGGAATCGGCGTTCAAGGTCTTGCCGAT 5155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596480644015520