Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq6751 118 1e-21 seq1823 96.9 3e-15 >seq6751 Length=68926 Score = 118 bits (130), Expect = 1e-21 Identities = 155/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| ||||| || || |||||||||||| | ||||| ||| | | Sbjct 5548 ATGCAAATTTTTGTTAAGACGCTGACTGGGAAAACTATTACGTTGGAAGTGGAATCTTCA 5607 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| |||||||||||||| ||||| || || Sbjct 5608 GATACTATCGACAATGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCAGACCAG 5667 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880 |||||| | || |||||||| ||||| ||||| || || || || | | ||||| Sbjct 5668 CAACGTCTAATTTTTGCCGGTAAACAACTGGAAGA--CG-GACGCACGCTTGCGGATTAC 5724 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| || || || || || || |||| Sbjct 5725 AACATTCAGAAAGAGTCTACGCTTCATCTGGT 5756 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||| ||| | |||||||| || || || || || || | ||||| || | Sbjct 4861 ACCATGCAGATTTTTGTGAAAACGCTTACTGGAAAGACCATCACTTTGGAAGTTGAGTCT 4920 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | ||||| ||||| ||||||||||||||||| ||||| ||| Sbjct 4921 TCAGACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCTGAT 4980 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || |||||| ||||||| || || ||||| || || || | | | | ||||| Sbjct 4981 CAGCAACGTCTGATCTTCGCTGGAAAACAACTAGAAGACGGACGTACTCTTGCGGATTAC 5040 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| || || ||||| || | ||||| ||| Sbjct 5041 AACATCCAGAAAGAATCAACGTTGCACTTAGTG 5073 >seq1823 Length=40296 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAG 24790 || ||||| ||||| |||||||||||| | | ||||| | || | || || ||| Sbjct 10874 GGAAAAACAATTACACTCGAAGTAGAATCAGCGGACACGATTGACAATGTCAAGAGCAAG 10815 Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 || |||||||| |||||||| ||||| || ||||||||| | || |||||||| ||||| Sbjct 10814 ATTCAAGACAAGGAAGGAATTCCTCCTGACCAACAACGTCTAATTTTTGCCGGAAAACAA 10755 Query 24851 CTGGAGGA 24858 || || || Sbjct 10754 CTTGAAGA 10747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449830514644120