Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq6751 149 5e-31 >seq6751 Length=68926 Score = 149 bits (164), Expect = 5e-31 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| || | ||| |||||||| || ||||| |||||||||| || || Sbjct 5535 ACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCAAGCGTTCGTCC 5476 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || |||||||| || || | |||| | ||||||||| || ||||| || || || Sbjct 5475 GTCTTCTAGTTGTTTACCGGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTT 5416 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || || | || | |||||| || |||||||| | |||||| Sbjct 5415 GTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCTGATGACTCTACTTCCAAAGTTAT 5356 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||||| ||||| |||||||| ||||||||||||||| Sbjct 5355 AGTTTTTCCAGTCAAGGTTTTCACAAATATCTGCATT 5319 Score = 132 bits (146), Expect = 4e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| || || | ||| |||||||| || ||||| |||||||||| || || Sbjct 5079 ACGTAGCACTAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTACGTCC 5020 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || |||||||| ||||| | |||| | ||||||||| || ||||| || ||||| Sbjct 5019 GTCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTT 4960 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | || ||| | || | ||||| ||| || ||||| | ||| | Sbjct 4959 GTCTTG-AATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAACTTCCAAAGTGA 4901 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| | ||||| ||||| |||||||| Sbjct 4900 TGGTCTTTCCAGTAAGCGTTTTCACAAAAATCTGCAT 4864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385163195026989