Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq6751 116 4e-21 >seq6751 Length=68926 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | ||||| || | || |||||||| || ||||||||||| Sbjct 5090 CCACCACGAAGACGTAGCACTAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCA 5031 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | |||||| |||||||| ||||| ||||||||||||||||||| ||||| Sbjct 5030 AGAGTACGTCCGTCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGA 4971 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| ||| || |||| | || | |||||||| | || ||| Sbjct 4970 ATTCCTTCTTTGTCTTGAATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAACT 4911 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | ||| | ||||| || || | ||||| || || || ||||| Sbjct 4910 TCCAAAGTGATGGTCTTTCCAGTAAGCGTTTTCACAAAAATCTGCAT 4864 Score = 111 bits (122), Expect = 2e-19 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA--GTCTTCGAGTTGTTTAC 137272 || |||||||| || ||||||||||| | || | | ||| |||||| |||||||||| Sbjct 5516 GTTGATTCTTTCTGGATGTTGTAATC-CGCAA-GCGTTCGTCCGTCTTCTAGTTGTTTAC 5459 Query 137273 CAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTT 137332 | || ||||||||||||||||||| ||||| || ||||| ||||| || || | Sbjct 5458 CGGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCTTCGCCT 5399 Query 137333 TTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATG 137392 | | | || | ||||||| | |||||||| | ||| | || || || ||||| | Sbjct 5398 TCACGTTGTCAATAGTGTCTGATGACTCTACTTCCAAAGTTATAGTTTTTCCAGTCAAGG 5339 Query 137393 TTTTTACGAATATTTGCAT 137411 |||| || ||||| ||||| Sbjct 5338 TTTTCACAAATATCTGCAT 5320 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA--GTCTT 137260 ||||| || | || |||||||| || ||||||||||| | || | | ||| ||||| Sbjct 5300 ACTAAGTGCAACGTTGATTCTTTCTGAATGTTGTAATC-CGCAA-GCGTTCGTCCGTCTT 5243 Query 137261 CGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGG 137320 | |||||||| ||||| ||||||||||||||||||| ||||| || ||||| ||||| Sbjct 5242 CTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCCT 5183 Query 137321 TAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCT 137380 || || || | | || | ||||| | | || ||||| | ||| | || | Sbjct 5182 GGATCTTCGCCTTCACGTTGTCAATAGTGTCCGATGACTCGACTTCCAAAGTTATGGTTT 5123 Query 137381 TGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 | || |||| || || || || |||||||| Sbjct 5122 TCCCAGTCAGCGTCTTAACAAAAATTTGCAT 5092 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | || | ||||| ||||| ||||| || ||||||||||| Sbjct 5774 CCACCACGAAGACGAAGTACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCA 5715 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| |||||| ||||||||||| ||| | || ||||||||||| || ||||| Sbjct 5714 AGCGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGA 5655 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| || || || | | || | || |||| | ||| ||| Sbjct 5654 ATTCCTTCTTTGTCCTGGATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCACT 5595 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | || || || |||| || || || || |||||||| Sbjct 5594 TCCAACGTAATAGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCAT 5548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488471151982800