Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3366 143 4e-28 >seq3366 Length=157547 Score = 143 bits (158), Expect = 4e-28 Identities = 394/592 (67%), Gaps = 14/592 (2%) Strand=Plus/Minus Query 1455725 CTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCG-CTACCAGCGGATATGGGA 1455783 || || || || ||||||||||||||| | || || || | | | | | | || ||||| Sbjct 39859 CTCCGAGAAAATCCGAACCGCTTTGTCTTATTTCCGATACAACAATCTGAG-ATTTGGGA 39801 Query 1455784 AATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCC- 1455842 ||||| | |||| | ||||| |||||||||||| || || |||| | || || Sbjct 39800 CATGTATAAGAAAG-CAGAGGCAAGCTTTTGGACCGCAGAAGAAATCGATTT-GGTGCAT 39743 Query 1455843 GACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTC 1455902 |||| | ||||| | | ||| | ||| | || || ||||| ||||| | Sbjct 39742 GACATGAATGACTGGCTTAATATATCGGACAATGAGAGACACTTTATCAAACACGTGTTG 39683 Query 1455903 GCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAA 1455962 ||||| ||| || ||||| ||||| || || || || || ||| || | | Sbjct 39682 GCCTTCTTT-GCAGCCAGTGATGGGATTGTTAATGAAAATCTCGCCATGAATTTCAGCAG 39624 Query 1455963 AGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACAT 1456022 ||||| ||| | || || || || | ||||| || ||||| || || || ||||| || Sbjct 39623 TGAGGTTCAAATCCCGGAAGCTCGATGCTTTTATGGATTCCAAATTGCAATAGAAAATAT 39564 Query 1456023 CCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGA 1456082 ||||| ||| || ||| | |||| || || ||| |||| || || ||| || | Sbjct 39563 ACACTCGGAAGTGTATTCGTTATTGATTGATACATACATCAAAGATCCAACCGAAAAACA 39504 Query 1456083 CCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGAT 1456142 || | | |||| || || || | |||| || | || || || | |||||| | Sbjct 39503 GCATTTACTATGCGCGATTGAAACAATCCCGTGCGTTACCAATAAAGCACAATGGGCGTT 39444 Query 1456143 GAAGTGGATCAA--CAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG 1456200 ||| ||| | | ||| | |||||| ||||| || | | || | |||||| | Sbjct 39443 GAAATGGTGCGATCCAAAGTATGCCTCG----TTTGCAGAAAGAGTGGTAGCCTTTGCGG 39388 Query 1456201 C-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCG 1456259 | ||||| || ||||||||||| || |||||| | || |||||||| ||||| || | Sbjct 39387 CCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCTATATTTTGGCTGAAGAAACGAG 39328 Query 1456260 GCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAG 1456311 | | ||||| || ||| |||||| || || | |||||||| || |||| Sbjct 39327 GATTGATGCCTGGACTT-TGCTTTTCAAATGAGCTCATCAGTCGTGATGAAG 39277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176660626024498